RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 NKX3-2P78367 333 aa26.18■■□□□ 1.78
SNX3-203ENST00000368979 LAMTOR4Q0VGL1 99 aa26.18■■□□□ 1.78
SNX3-203ENST00000368979 TBX2Q13207 712 aaPredicted RBP26.18■■□□□ 1.78
SNX3-203ENST00000368979 ZBTB10Q96DT7 871 aa26.18■■□□□ 1.78
SNX3-203ENST00000368979 TMEM134Q9H6X4 195 aa26.18■■□□□ 1.78
SNX3-203ENST00000368979 SUCLA2Q9P2R7 463 aaPredicted RBP26.18■■□□□ 1.78
SNX3-203ENST00000368979 PHLPP2Q6ZVD8 1323 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 A0A1W2PQC6 194 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 HMGCRP04035 888 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 EPB41P11171 864 aaKnown RBP26.17■■□□□ 1.78
SNX3-203ENST00000368979 PRKAR2AP13861 404 aaKnown RBP26.17■■□□□ 1.78
SNX3-203ENST00000368979 CLCN3P51790 818 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 GSDMDP57764 484 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 MFSD10Q14728 455 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 CEP135Q66GS9 1140 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 CDCA2Q69YH5 1023 aaPredicted RBP26.17■■□□□ 1.78
SNX3-203ENST00000368979 MTHFD1LQ6UB35 978 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 PXYLP1Q8TE99 480 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 NDST4Q9H3R1 872 aa26.17■■□□□ 1.78
SNX3-203ENST00000368979 METTL14Q9HCE5 456 aaKnown RBP26.17■■□□□ 1.78
SNX3-203ENST00000368979 MYADML2A6NDP7 307 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 MYL3P08590 195 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 CNGA1P29973 690 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 KIAA0753Q2KHM9 967 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 MARCH8Q5T0T0 291 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 MAP3K21Q5TCX8 1036 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 BORCS6Q96GS4 357 aa26.16■■□□□ 1.78
SNX3-203ENST00000368979 ARMCX3Q9UH62 379 aaPredicted RBP26.16■■□□□ 1.78
SNX3-203ENST00000368979 ANKRD63C9JTQ0 380 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 PES1O00541 588 aaKnown RBP26.15■■□□□ 1.78
SNX3-203ENST00000368979 CCND3P30281 292 aaPredicted RBP26.15■■□□□ 1.78
SNX3-203ENST00000368979 PSMC2P35998 433 aaKnown RBP26.15■■□□□ 1.78
SNX3-203ENST00000368979 PSEN2P49810 448 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 CYP2J2P51589 502 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 PURAQ00577 322 aaKnown RBP26.15■■□□□ 1.78
SNX3-203ENST00000368979 ARHGEF6Q15052 776 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 SLC39A4Q6P5W5 647 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 METTL13Q8N6R0 699 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 RAET1EQ8TD07 263 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 CBWD1Q9BRT8 395 aa26.15■■□□□ 1.78
SNX3-203ENST00000368979 RRN3P2A6NIE6 340 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 ASAP2O43150 1006 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 PIGRP01833 764 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 C6orf222P0C671 652 aaPredicted RBP26.14■■□□□ 1.78
SNX3-203ENST00000368979 SMIM10L2AP0DMW4 78 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 SMIM10L2BP0DMW5 78 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 RARBP10826 455 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 STRN3Q13033 797 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 ARMCX5Q6P1M9 558 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 RHPN2Q8IUC4 686 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 FAM186BQ8IYM0 893 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 KATNAL1Q9BW62 490 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 KCNF1Q9H3M0 494 aa26.14■■□□□ 1.78
SNX3-203ENST00000368979 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.14■■□□□ 1.78
SNX3-203ENST00000368979 NRCAMQ92823 1304 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 K7ERI5 159 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 KPNA6O60684 536 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 ADSSP30520 456 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 EFNA5P52803 228 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 PRMT2P55345 433 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 PPP2R3AQ06190 1150 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 TFDP1Q14186 410 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 ARID5BQ14865 1188 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 FKBP15Q5T1M5 1219 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 RNF149Q8NC42 400 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 LMBR1Q8WVP7 490 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 ERGIC2Q96RQ1 377 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 CCDC113Q9H0I3 377 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 HSPBP1Q9NZL4 362 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 FRMD4BQ9Y2L6 1034 aa26.14■■□□□ 1.77
SNX3-203ENST00000368979 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.14■■□□□ 1.773e-7■□□□□ 10
SNX3-203ENST00000368979 EXOC3O60645 756 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 ADAMTS4O75173 837 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 GJB1P08034 283 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 CCDC150Q8NCX0 1101 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 CACTINQ8WUQ7 758 aaKnown RBP26.13■■□□□ 1.77
SNX3-203ENST00000368979 ZNF830Q96NB3 372 aaPredicted RBP26.13■■□□□ 1.77
SNX3-203ENST00000368979 C2orf40Q9H1Z8 148 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 PCIF1Q9H4Z3 704 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 SETD4Q9NVD3 440 aa26.13■■□□□ 1.77
SNX3-203ENST00000368979 HNRNPDLO14979 420 aaKnown RBP26.12■■□□□ 1.77
SNX3-203ENST00000368979 SRGAP2CP0DJJ0 459 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 TMOD1P28289 359 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 ZBTB8OSQ8IWT0 167 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 XXYLT1Q8NBI6 393 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 BICD1Q96G01 975 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 NFKBIZQ9BYH8 718 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 SPC25Q9HBM1 224 aa26.12■■□□□ 1.77
SNX3-203ENST00000368979 MBLAC1A4D2B0 266 aaPredicted RBP26.11■■□□□ 1.77
SNX3-203ENST00000368979 MAPK13O15264 365 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 PGK1P00558 417 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 EDN1P05305 212 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 GARTP22102 1010 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 MAP2K1Q02750 393 aaPredicted RBP26.11■■□□□ 1.77
SNX3-203ENST00000368979 POU5F1BQ06416 359 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 LRRC8AQ8IWT6 810 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 XPNPEP3Q9NQH7 507 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.11■■□□□ 1.77
SNX3-203ENST00000368979 STYXL1Q9Y6J8 313 aa26.11■■□□□ 1.77
SNX3-203ENST00000368979 LIG4P49917 911 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms