RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 MTCH2Q9Y6C9 303 aa10.95□□□□□ -0.66
CD48-202ENST00000368046 MYH9P35579 1960 aaKnown RBP10.95□□□□□ -0.66
CD48-202ENST00000368046 ADGRA3Q8IWK6 1321 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 VWA3AA6NCI4 1184 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 EPOPA6NHQ4 379 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 PP2D1A8MPX8 630 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 H3BNC9 293 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 HOXA2O43364 376 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 STX6O43752 255 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 LPXNO60711 386 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 USO1O60763 962 aaKnown RBP10.94□□□□□ -0.66
CD48-202ENST00000368046 ZNF623O75123 536 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 SKIP12755 728 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 GLRA2P23416 452 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 PHKA2P46019 1235 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 PTENP60484 403 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 NCBP1Q09161 790 aaKnown RBP10.94□□□□□ -0.66
CD48-202ENST00000368046 SF3A1Q15459 793 aaKnown RBP10.94□□□□□ -0.66
CD48-202ENST00000368046 FAM102BQ5T8I3 360 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 PADI6Q6TGC4 694 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 MAEAQ7L5Y9 396 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 ECHDC2Q86YB7 292 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 CMTR2Q8IYT2 770 aaKnown RBP10.94□□□□□ -0.66
CD48-202ENST00000368046 SLC17A8Q8NDX2 589 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 AK8Q96MA6 479 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 MMTAG2Q9BU76 263 aaKnown RBP10.94□□□□□ -0.66
CD48-202ENST00000368046 NFKBIZQ9BYH8 718 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 BHMT2Q9H2M3 363 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 MINDY3Q9H8M7 445 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 DDX19AQ9NUU7 478 aaKnown RBP10.94□□□□□ -0.66
CD48-202ENST00000368046 MTMR6Q9Y217 621 aa10.94□□□□□ -0.66
CD48-202ENST00000368046 CDH23Q9H251 3354 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 E9PMD0 336 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 C5orf67F2Z3F1 127 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 STK25O00506 426 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 EYA4O95677 639 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 HSP90AA1P07900 732 aaKnown RBP10.93□□□□□ -0.66
CD48-202ENST00000368046 LINC00271P0C7V0 271 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
CD48-202ENST00000368046 AXLP30530 894 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 HOXA11P31270 313 aaPredicted RBP10.93□□□□□ -0.66
CD48-202ENST00000368046 RESTQ13127 1097 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 GPM6BQ13491 265 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 CCDC85BQ15834 202 aaPredicted RBP10.93□□□□□ -0.66
CD48-202ENST00000368046 HYIQ5T013 277 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 HS6ST3Q8IZP7 471 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 ASAP3Q8TDY4 903 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 PPM1EQ8WY54 764 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 PLVAPQ9BX97 442 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 NT5C3AQ9H0P0 336 aa10.93□□□□□ -0.66
CD48-202ENST00000368046 PIN4Q9Y237 131 aaKnown RBP10.93□□□□□ -0.66
CD48-202ENST00000368046 TBKBP1A7MCY6 615 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 INO80B-WBP1J3KQ70 363 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 SLC26A4O43511 780 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 LONP1P36776 959 aaKnown RBP10.92□□□□□ -0.66
CD48-202ENST00000368046 UBA7P41226 1012 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 CAPSQ13938 189 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 NAALADL2Q58DX5 795 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 TWF2Q6IBS0 349 aaKnown RBP10.92□□□□□ -0.66
CD48-202ENST00000368046 FAM173BQ6P4H8 233 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 MRPL10Q7Z7H8 261 aaKnown RBP10.92□□□□□ -0.66
CD48-202ENST00000368046 ZNF598Q86UK7 904 aaKnown RBP10.92□□□□□ -0.66
CD48-202ENST00000368046 P2RX5Q93086 422 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 CASD1Q96PB1 797 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 TMEM117Q9H0C3 514 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 POLR3FQ9H1D9 316 aaPredicted RBP10.92□□□□□ -0.66
CD48-202ENST00000368046 GPRC5CQ9NQ84 441 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 AGPAT5Q9NUQ2 364 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 TYW1Q9NV66 732 aaKnown RBP10.92□□□□□ -0.66
CD48-202ENST00000368046 CLIC4Q9Y696 253 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 EVPLQ92817 2033 aa10.92□□□□□ -0.66
CD48-202ENST00000368046 SIP14410 1827 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 ERLIN2O94905 339 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 FGFR1P11362 822 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 CTNNB1P35222 781 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 GATMP50440 423 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 RAB27AP51159 221 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 MBTD1Q05BQ5 628 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 PTPAQ15257 358 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 ZRSR1Q15695 479 aaKnown RBP10.91□□□□□ -0.66
CD48-202ENST00000368046 PTPROQ16827 1216 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 PAN2Q504Q3 1202 aaKnown RBP10.91□□□□□ -0.66
CD48-202ENST00000368046 RINT1Q6NUQ1 792 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 KCNK18Q7Z418 384 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 CABP7Q86V35 215 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 ABI1Q8IZP0 508 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 SYT2Q8N9I0 419 aaPredicted RBP10.91□□□□□ -0.66
CD48-202ENST00000368046 RNF169Q8NCN4 708 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 CNNM3Q8NE01 707 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 GDPD5Q8WTR4 605 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 RSPH1Q8WYR4 309 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 KIFAP3Q92845 792 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 PGBD4Q96DM1 585 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 CALML4Q96GE6 196 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 CDK5RAP3Q96JB5 506 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 IFT74Q96LB3 600 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 PNMA5Q96PV4 448 aa10.91□□□□□ -0.66
CD48-202ENST00000368046 C11orf84Q9BUA3 381 aaPredicted RBP10.91□□□□□ -0.66
CD48-202ENST00000368046 LMAN2LQ9H0V9 348 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms