RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 KLC2Q9H0B6 622 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SLC38A10Q9HBR0 1119 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 CYP26B1Q9NR63 512 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 ADAM22Q9P0K1 906 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 INO80B-WBP1J3KQ70 363 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 FOXN1O15353 648 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 CTDNEP1O95476 244 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 GUCY1A2P33402 732 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SLC18A3Q16572 532 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 MTERF2Q49AM1 385 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 NFRKBQ6P4R8 1299 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 ZNF564Q8TBZ8 553 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 LRGUKQ96M69 825 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 GCOM2Q9BZD3 368 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 INO80BQ9C086 356 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 ASNSD1Q9NWL6 643 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SPATA31D1Q6ZQQ2 1576 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 F8W8V4 182 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 CHUKO15111 745 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 GPC4O75487 556 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 GH2P01242 217 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 QARSP47897 775 aaKnown RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 STX1BP61266 288 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 BASP1P80723 227 aaKnown RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 DRAP1Q14919 205 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 PDIA6Q15084 440 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 NKX1-1Q15270 411 aaPredicted RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 TRIM68Q6AZZ1 485 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 PDXDC2PQ6P474 469 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 ARMCX2Q7L311 632 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 WDR48Q8TAF3 677 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SNF8Q96H20 258 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 DYDC2Q96IM9 177 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SRPK1Q96SB4 655 aaKnown RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 EFHD1Q9BUP0 239 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 C2orf40Q9H1Z8 148 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 NOP53Q9NZM5 478 aaKnown RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 POTEB3A0JP26 581 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 POTECB2RU33 542 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 OPHN1O60890 802 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 TTC4O95801 387 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 PSMC5P62195 406 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 TFAMQ00059 246 aaKnown RBP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 PTK2BQ14289 1009 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 QRICH1Q2TAL8 776 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 POTEBQ6S5H4 581 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 KRT27Q7Z3Y8 459 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 NLRP14Q86W24 1093 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 ANAPC7Q9UJX3 599 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 FMR1Q06787 632 aaKnown RBP eCLIP9.62□□□□□ -0.87
SYNE1-205ENST00000367251 FAM149B1Q96BN6 582 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 PITPNM3Q9BZ71 974 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 TMEM260Q9NX78 707 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 SENP1Q9P0U3 644 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 MAP10Q9P2G4 905 aa9.62□□□□□ -0.87
SYNE1-205ENST00000367251 GOLGA8SH3BPF8 625 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 RTN2O75298 545 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 PSMA2P25787 234 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 IREB2P48200 963 aaKnown RBP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 TRIM55Q9BYV6 548 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 PPP1R9AQ9ULJ8 1098 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 HNRNPCL1O60812 293 aaKnown RBP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 CAPN15O75808 1086 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 STMN1P16949 149 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 CA4P22748 312 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 SERPINB6P35237 376 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 CASP2P42575 452 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 ZNF667Q5HYK9 610 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 OR6B2Q6IFH4 312 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 SCYL3Q8IZE3 742 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 STAG2Q8N3U4 1231 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 ARHGEF1Q92888 912 aaKnown RBP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 CRAMP1Q96RY5 1269 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 TLK1Q9UKI8 766 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 INTUQ9ULD6 942 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 SNX24Q9Y343 169 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 HNRNPCL2B2RXH8 293 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 SPECC1L-ADORA2AF8WAN1 911 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 KRT38O76015 456 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 ZBED1O96006 694 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 KRT7P08729 469 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 SETSIPP0DME0 302 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 CYP2C19P33261 490 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 COPB2P35606 906 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 IL1RL1Q01638 556 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 PDCLQ13371 301 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 MMEL1Q495T6 779 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 FAM133BQ5BKY9 247 aaKnown RBP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 CIAPIN1Q6FI81 312 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 MMGT1Q8N4V1 131 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 PDCD7Q8N8D1 485 aaKnown RBP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 EIF2AK1Q9BQI3 630 aaKnown RBP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 NUP85Q9BW27 656 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 STK33Q9BYT3 514 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 FOXP3Q9BZS1 431 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 PITPNM2Q9BZ72 1349 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 EIF3DO15371 548 aaKnown RBP eCLIP9.61□□□□□ -0.87
SYNE1-205ENST00000367251 SLCO1A2P46721 670 aa9.61□□□□□ -0.87
SYNE1-205ENST00000367251 PPARDQ03181 441 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms