RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 HEPHQ9BQS7 1158 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 CPPED1Q9BRF8 314 aaPredicted RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 TMEM79Q9BSE2 394 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 RSRP1Q9BUV0 290 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 BTBD2Q9BX70 525 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 QTRT1Q9BXR0 403 aaKnown RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 SEMA4CQ9C0C4 833 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 VPS16Q9H269 839 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 INCENPQ9NQS7 918 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 CYP26B1Q9NR63 512 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 TUBA8Q9NY65 449 aaPredicted RBP0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 AKT3Q9Y243 479 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 EFR3BQ9Y2G0 817 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 MAP3K2Q9Y2U5 619 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 VWA7Q9Y334 891 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 PCDHAC2Q9Y5I4 1007 aa0.73□□□□□ -2.29
RNU6-340P-201ENST00000364005 KAT6AQ92794 2004 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 A0A087WYN8 130 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 LINC01548A6NM66 108 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 C4orf47A7E2U8 309 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 LEFTY2O00292 366 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 LINC01565O15544 149 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 MEFVO15553 781 aaPredicted RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 H2AFYO75367 372 aaKnown RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 LATS1O95835 1130 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 ITGAVP06756 1048 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 COL6A2P12110 1019 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 WT1P19544 449 aaPredicted RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 PTGS1P23219 599 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 MAPK1P28482 360 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 MPGP29372 298 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 CXCR3P49682 368 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 EPHA5P54756 1037 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 KRTAP12-2P59991 146 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 RNASE9P60153 205 aaKnown RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 E2F1Q01094 437 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 TFF2Q03403 129 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 KCNAB2Q13303 367 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 TCIRG1Q13488 830 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 PWP1Q13610 501 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 NPY5RQ15761 445 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 KRTAP24-1Q3LI83 254 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 SUPT20HL1Q3ZLR7 823 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 GAGE13Q4V321 117 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 PXDC1Q5TGL8 231 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 KANK2Q63ZY3 851 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 SLC18B1Q6NT16 456 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 KLHDC10Q6PID8 442 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 OTOP3Q7RTS5 596 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 GPR149Q86SP6 731 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 KIAA0825Q8IV33 1275 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 TAB3Q8N5C8 712 aaPredicted RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 WDR48Q8TAF3 677 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 UHMK1Q8TAS1 419 aaKnown RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 LMLNQ96KR4 655 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 CPEB1Q9BZB8 566 aaKnown RBP0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 SMURF1Q9HCE7 757 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 NCDNQ9UBB6 729 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 AFG3L2Q9Y4W6 797 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 NUB1Q9Y5A7 615 aa0.72□□□□□ -2.29
RNU6-340P-201ENST00000364005 USP31Q70CQ4 1352 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 CD8B2A6NJW9 211 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 NKRFO15226 690 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 OAZ2O95190 189 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 FOSP01100 380 aaPredicted RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 LDHBP07195 334 aaKnown RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 ZSCAN20P17040 1043 aaPredicted RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 ECE1P42892 770 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 SPIDRQ14159 915 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 UBE3CQ15386 1083 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 FAM214AQ32MH5 1076 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 GNPTABQ3T906 1256 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 TMEM119Q4V9L6 283 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 ZNF585BQ52M93 769 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 PDCD4Q53EL6 469 aaKnown RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 METTL24Q5JXM2 366 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 KRT40Q6A162 431 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 GTF2IRD2BQ6EKJ0 949 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 LRSAM1Q6UWE0 723 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 KCTD1Q719H9 257 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 SH2D6Q7Z4S9 175 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 AMIGO2Q86SJ2 522 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 GTF2IRD2Q86UP8 949 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 SYT12Q8IV01 421 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 BCL6BQ8N143 479 aaPredicted RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 OR52N2Q8NGI0 321 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 SLC7A14Q8TBB6 771 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 SH2D3AQ9BRG2 576 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 NKX2-4Q9H2Z4 354 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 NCOA5Q9HCD5 579 aaKnown RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 KCNQ5Q9NR82 932 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 GJB4Q9NTQ9 266 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 RNF19AQ9NV58 838 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 DSEQ9UL01 958 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 WDR3Q9UNX4 943 aaKnown RBP eCLIP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 EMC9Q9Y3B6 208 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 SUPT16HQ9Y5B9 1047 aaKnown RBP0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 ENTPD2Q9Y5L3 495 aa0.71□□□□□ -2.3
RNU6-340P-201ENST00000364005 KLF2Q9Y5W3 355 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms