RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SHPRHQ149N8 1683 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 A0A1W2PQC6 194 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 KBTBD13C9JR72 458 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 SGK1O00141 431 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 MYBP10242 640 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 HERVK_113P62684 666 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 P3H4Q92791 437 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 UNC45AQ9H3U1 944 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ASAP2O43150 1006 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ARP10275 920 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 CYP2C9P11712 490 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 ZC2HC1CQ53FD0 456 aaPredicted RBP14.9□□□□□ -0.02
CTR9-201ENST00000361367 RPUSD2Q8IZ73 545 aaKnown RBP14.9□□□□□ -0.02
CTR9-201ENST00000361367 KCTD6Q8NC69 237 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 SPATC1LQ9H0A9 340 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 RNF14Q9UBS8 474 aa14.9□□□□□ -0.02
CTR9-201ENST00000361367 EBAG9O00559 213 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 RGS2P41220 211 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 TSPY1Q01534 308 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 CDO1Q16878 200 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 CAPN12Q6ZSI9 719 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 ENOSF1Q7L5Y1 443 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 SYTL5Q8TDW5 730 aaPredicted RBP14.89□□□□□ -0.03
CTR9-201ENST00000361367 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 C11orf70Q9BRQ4 267 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 DSG3P32926 999 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 TOB1P50616 345 aaPredicted RBP14.89□□□□□ -0.03
CTR9-201ENST00000361367 TMEM62Q0P6H9 643 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 IER5Q5VY09 327 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 SCN4BQ8IWT1 228 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 BBS5Q8N3I7 341 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 PBKQ96KB5 322 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 PLCD4Q9BRC7 762 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 PDCD2LQ9BRP1 358 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 ANAPC7Q9UJX3 599 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 DAAM1Q9Y4D1 1078 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 BAZ2BQ9UIF8 2168 aaKnown RBP14.89□□□□□ -0.03
CTR9-201ENST00000361367 HSPA6P17066 643 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 PSMA2P25787 234 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 SNX1Q13596 522 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 EDRF1Q3B7T1 1238 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 EFCAB12Q6NXP0 572 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 USP50Q70EL3 339 aaPredicted RBP14.89□□□□□ -0.03
CTR9-201ENST00000361367 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 TTC39CQ8N584 583 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 ANKS1AQ92625 1134 aa14.89□□□□□ -0.03
CTR9-201ENST00000361367 MCF2LO15068 1137 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 SLC16A3O15427 465 aaKnown RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 PHBP35232 272 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 PPARDQ03181 441 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 PLCB1Q9NQ66 1216 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 CYP11B2P19099 503 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 HHATQ5VTY9 493 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 RABGGTAQ92696 567 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 PKNOX2Q96KN3 472 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 CPA4Q9UI42 421 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 EIF3CLB5ME19 914 aaKnown RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 RGS16O15492 202 aaPredicted RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 GNA15P30679 374 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 GBP1P32455 592 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 WDR72Q3MJ13 1102 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 SYT2Q8N9I0 419 aaPredicted RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 SMC6Q96SB8 1091 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 EIF3CQ99613 913 aaKnown RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 LIMA1Q9UHB6 759 aaKnown RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 MAD1L1Q9Y6D9 718 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 NRXN3Q9Y4C0 1643 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 GPC5P78333 572 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 GFPT1Q06210 699 aaPredicted RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 SNRNP35Q16560 246 aaKnown RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 ENGASEQ8NFI3 743 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 CDCA5Q96FF9 252 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 ZNF560Q96MR9 790 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 CPSF3Q9UKF6 684 aaKnown RBP14.88□□□□□ -0.03
CTR9-201ENST00000361367 PCDHAC2Q9Y5I4 1007 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 UBE4BO95155 1302 aa14.88□□□□□ -0.03
CTR9-201ENST00000361367 A8MXQ7 604 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 VWA5AO00534 786 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 UHMK1Q8TAS1 419 aaKnown RBP14.87□□□□□ -0.03
CTR9-201ENST00000361367 GSDMBQ8TAX9 411 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 EDEM3Q9BZQ6 932 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 FZD1Q9UP38 647 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 XRN1Q8IZH2 1706 aaKnown RBP14.87□□□□□ -0.03
CTR9-201ENST00000361367 SMIM22K7EJ46 135 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 CPT1AP50416 773 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 RWDD2BP57060 319 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 SETDB1Q15047 1291 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 IQCB1Q15051 598 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 CCDC144BQ3MJ40 725 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 CEP85LQ5SZL2 805 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 TOGARAM2Q6ZUX3 1019 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 TMEM106CQ9BVX2 250 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 IGSF9BQ9UPX0 1349 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 GIPC1O14908 333 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 CALB1P05937 261 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 GRB10Q13322 594 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 ATP2A3Q93084 1043 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 RRN3P2A6NIE6 340 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 M0QYV0 167 aa14.87□□□□□ -0.03
CTR9-201ENST00000361367 HEXIM1O94992 359 aaKnown RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms