RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 TRIM71Q2Q1W2 868 aaKnown RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 MIGA2Q7L4E1 593 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 TRIM11Q96F44 468 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 NDEL1Q9GZM8 345 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 ETNK1Q9HBU6 452 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 SLC39A2Q9NP94 309 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 STMN3Q9NZ72 180 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 DUX4Q9UBX2 424 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 CFAP73A6NFT4 308 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 IRF1P10914 325 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 PTH1RQ03431 593 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 FAM47EQ6ZV65 393 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 NLRP14Q86W24 1093 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 LPIN2Q92539 896 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 APPBP2Q92624 585 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 ACCSQ96QU6 501 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 PLEKHF1Q96S99 279 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 MAGEB5Q9BZ81 275 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 USE1Q9NZ43 259 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 MKL2Q9ULH7 1088 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 EDC4Q6P2E9 1401 aaKnown RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 ERBB3P21860 1342 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 KDM5DQ9BY66 1539 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 AGRPO00253 132 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 HUS1O60921 280 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 GDF11O95390 407 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 PLS3P13797 630 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 MAP3K10Q02779 954 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 NKX1-1Q15270 411 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 DPCR1Q3MIW9 517 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 CRLF3Q8IUI8 442 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 POMGNT2Q8NAT1 580 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 TTC8Q8TAM2 541 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 CNOT6LQ96LI5 555 aaKnown RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 FAM161BQ96MY7 647 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 TRIM62Q9BVG3 475 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 SPATA16Q9BXB7 569 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 PARVGQ9HBI0 331 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 ZC3H7BQ9UGR2 993 aaKnown RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 LSM7Q9UK45 103 aaKnown RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 ZNF532Q9HCE3 1301 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 RNF103-CHMP3A0A140T963 221 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 EYA2O00167 538 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 RASGRF1Q13972 1273 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 SPARCL1Q14515 664 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 TRIP13Q15645 432 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 EXOC3L4Q17RC7 722 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 SHROOM1Q2M3G4 852 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 SLFNL1Q499Z3 407 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 PDXDC2PQ6P474 469 aa8.85□□□□□ -0.99
CTNND1-202ENST00000361332 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
CTNND1-202ENST00000361332 TRIM66O15016 1216 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 PEX1O43933 1283 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 PSAPP07602 524 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 RALAP11233 206 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 DR1Q01658 176 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 CYP27A1Q02318 531 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 TOMM20Q15388 145 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 FSCBQ5H9T9 825 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 HAUS6Q7Z4H7 955 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 DEPDC7Q96QD5 511 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 OSBPL9Q96SU4 736 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 DDX50Q9BQ39 737 aaKnown RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 AP1M1Q9BXS5 423 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 GINM1Q9NU53 330 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 BABAM1Q9NWV8 329 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 CLIC4Q9Y696 253 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 TNRQ92752 1358 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 UHRF1BP1LA0JNW5 1464 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 DYTNA2CJ06 578 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 E7EWF7 191 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 RNMTO43148 476 aaKnown RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 TIPRLO75663 272 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 MRPS25P82663 173 aaKnown RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 SLC44A4Q53GD3 710 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 ZNF394Q53GI3 561 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 LEMD2Q8NC56 503 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 ARHGEF3Q9NR81 526 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 EHD2Q9NZN4 543 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 PCDHB8Q9UN66 801 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 GDAQ9Y2T3 454 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 SKAP2O75563 359 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 ACSL3O95573 720 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 CEP78Q5JTW2 689 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 KRT39Q6A163 491 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 NGRNQ9NPE2 291 aaKnown RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 FBXL21Q9UKT6 434 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 RPS8P62241 208 aaKnown RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 PWP1Q13610 501 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 BBS9Q3SYG4 887 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 BZW1Q7L1Q6 419 aaKnown RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 DDIASQ8IXT1 998 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 FAF2Q96CS3 445 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 SUCLG2Q96I99 432 aa8.84□□□□□ -0.99
CTNND1-202ENST00000361332 FHDC1Q9C0D6 1143 aaPredicted RBP8.84□□□□□ -0.99
CTNND1-202ENST00000361332 ATP11BQ9Y2G3 1177 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms