RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 CYLDQ9NQC7 956 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PALM3A6NDB9 673 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 CDC25CP30307 473 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 SIX5Q8N196 739 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 C17orf50Q8WW18 174 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 SYCE1LA8MT33 242 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PHF2O75151 1096 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 CPA2P48052 419 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 NAB2Q15742 525 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 TRIM50Q86XT4 487 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 TRIM59Q8IWR1 403 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 RHOT2Q8IXI1 618 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 DCLK2Q8N568 766 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PSMC3IPQ9P2W1 217 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 KIF1BO60333 1816 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 ABCA5Q8WWZ7 1642 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PLXNC1O60486 1568 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 SNX30Q5VWJ9 437 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 TTC33Q6PID6 262 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 ANGPTL3Q9Y5C1 460 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 MYBL2P10244 700 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 IFNAR1P17181 557 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 TTMPQ5BVD1 217 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 THEMIS2Q5TEJ8 643 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PPP1R2P3Q6NXS1 205 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 OMA1Q96E52 524 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 NDNQ99608 321 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 MRPL1Q9BYD6 325 aaKnown RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 SH3GLB1Q9Y371 365 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 TRPM2O94759 1503 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 IL10P22301 178 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 ADORA1P30542 326 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 SYDE1Q6ZW31 735 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 KRT26Q7Z3Y9 468 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 ATXN2LQ8WWM7 1075 aaKnown RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 RXFP1Q9HBX9 757 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 AFG3L2Q9Y4W6 797 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PCDH11XQ9BZA7 1347 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 KLHL2O95198 593 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 HSPA4LO95757 839 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 SRGNP10124 158 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 HMOX2P30519 316 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 GABPAQ06546 454 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 RASGRF1Q13972 1273 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 HORMAD1Q86X24 394 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 FAM186BQ8IYM0 893 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 GALNT4Q8N4A0 578 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 AK8Q96MA6 479 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 NR1H4Q96RI1 486 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 BLOC1S6Q9UL45 172 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 CAB39Q9Y376 341 aaPredicted RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 CLASP1Q7Z460 1538 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 MYOM2P54296 1465 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 VIL1P09327 827 aaKnown RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 TRMT5Q32P41 509 aaKnown RBP6.46□□□□□ -1.38
VPS13B-203ENST00000358544 ZBED8Q8IZ13 594 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 MAGEB18Q96M61 343 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 PARVBQ9HBI1 364 aa6.46□□□□□ -1.38
VPS13B-203ENST00000358544 GNGT2O14610 69 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 LSM1O15116 133 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 LIFRP42702 1097 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 KRT17Q04695 432 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 LENG1Q96BZ8 264 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 OSBPL8Q9BZF1 889 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 KLHL4Q9C0H6 718 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 COMMD3-BMI1R4GMX3 469 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PDS5AQ29RF7 1337 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PCDH11YQ9BZA8 1340 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 H3BRJ5 948 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 TRIM16O95361 564 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 KITP10721 976 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PAPD7Q5XG87 772 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 TRAF7Q6Q0C0 670 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 NANOGNBQ7Z5D8 188 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ZNF184Q99676 751 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ZMYND8Q9ULU4 1186 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PPIP5K2O43314 1243 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 RTN3O95197 1032 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 CCDC103Q8IW40 242 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PPP2R3CQ969Q6 453 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DOCK7Q96N67 2140 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 OPLAHO14841 1288 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 HNRNPRO43390 633 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PTDSS1P48651 473 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 TRIM25Q14258 630 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 INPP5AQ14642 412 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 C16orf89Q6UX73 402 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 MSL3Q8N5Y2 521 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 EPS8L3Q8TE67 593 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ADA2Q9NZK5 511 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DDX25Q9UHL0 483 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 SNX5Q9Y5X3 404 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 NR3C1P04150 777 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 RAG1P15918 1043 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 SIRT1Q96EB6 747 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 WNT8AQ9H1J5 351 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PARVGQ9HBI0 331 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 SAP30BPQ9UHR5 308 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 L3MBTL1Q9Y468 752 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms