RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PHF2O75151 1096 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 PHKG2P15735 406 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 METTL16Q86W50 562 aaKnown RBP13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 EXOC8Q8IYI6 725 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 SNX25Q9H3E2 840 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 DDX56Q9NY93 547 aaKnown RBP13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 PI4K2BG5E9Z4 385 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 TMEM35BQ8NCS4 154 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 ISCUQ9H1K1 167 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 BLOC1S6Q9UL45 172 aa13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 MAGED2Q9UNF1 606 aaPredicted RBP13.51□□□□□ -0.25
SYNCRIP-201ENST00000355238 ITIH2P19823 946 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 GTF2IP78347 998 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 LAMB3Q13751 1172 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 TSGA10IPQ3SY00 556 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 LRRC8EQ6NSJ5 796 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ATL2Q8NHH9 583 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 FTLP02792 175 aaPredicted RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 HSPA13P48723 471 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 COASYQ13057 564 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 MRPL28Q13084 256 aaKnown RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 NPHS2Q9NP85 383 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 IP6K2Q9UHH9 426 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 PFKFB3Q16875 520 aaPredicted RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 KIF2BQ8N4N8 673 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 SUPT20HQ8NEM7 779 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 CHP1Q99653 195 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 FOXP3Q9BZS1 431 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ERVK-7P63135 1459 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 MAP3K15Q6ZN16 1313 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 PIK3R2O00459 728 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 PRKAB2O43741 272 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 KLHL2O95198 593 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 UBTFL6P0CB48 400 aaPredicted RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ALDH18A1P54886 795 aaKnown RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLC18A3Q16572 532 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 RIBC1Q8N443 379 aaPredicted RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 RYBPQ8N488 228 aaPredicted RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ATP6V0A4Q9HBG4 840 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ASNSD1Q9NWL6 643 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ZFATQ9P243 1243 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 REREQ9P2R6 1566 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ADCY3O60266 1144 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 PLEKHA8P1O95397 391 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 DRAP1Q14919 205 aaPredicted RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 TRIP10Q15642 601 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 DGKHQ86XP1 1220 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 DDI1Q8WTU0 396 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 COA7Q96BR5 231 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ANO3Q9BYT9 981 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLC13A1Q9BZW2 595 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 AS3MTQ9HBK9 375 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 UBN1Q9NPG3 1134 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 KIF17Q9P2E2 1029 aa13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ADD3Q9UEY8 706 aaKnown RBP13.5□□□□□ -0.25
SYNCRIP-201ENST00000355238 ANP32DO95626 131 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 SRGNP10124 158 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 NQO1P15559 274 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 CARSP49589 748 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 ADRM1Q16186 407 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 PROSER3Q2NL68 480 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 C16orf89Q6UX73 402 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 C4orf50Q6ZRC1 276 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 RBM12Q9NTZ6 932 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 RHBDL2Q9NX52 303 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 KRT7P08729 469 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 PMLP29590 882 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 DEFA1P59665 94 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 DEFA3P59666 94 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 KNOP1Q1ED39 458 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 SLFN12LQ6IEE8 588 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 MYCBPAPQ8TBZ2 947 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 MS4A14Q96JA4 679 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 CEP170P1Q96L14 293 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 CCT7Q99832 543 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 BHMT2Q9H2M3 363 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 MRGBPQ9NV56 204 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 ADGBQ8N7X0 1667 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 PDE5AO76074 875 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 RAD9BQ6WBX8 426 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 SUGP1Q8IWZ8 645 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 EME1Q96AY2 570 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 ARL8AQ96BM9 186 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 ASPSCR1Q9BZE9 553 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 PNMA6FA0A0J9YX94 578 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 CCDC15Q0P6D6 951 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 HIF1AQ16665 826 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 TUBE1Q9UJT0 475 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 MLH3Q9UHC1 1453 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 LRRIQ3A6PVS8 624 aaPredicted RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 CD58P19256 250 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 SERPINB1P30740 379 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 NOA1Q8NC60 698 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 LZICQ8WZA0 190 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 NXF1Q9UBU9 619 aaKnown RBP13.49□□□□□ -0.25
SYNCRIP-201ENST00000355238 LDHAP00338 332 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms