RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PCDHGC5Q9Y5F6 944 aa18.17■□□□□ 0.5
SAMM50-201ENST00000350028 TARSL2A2RTX5 802 aaKnown RBP18.16■□□□□ 0.5
SAMM50-201ENST00000350028 F8VZ95 297 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 TBC1D8O95759 1140 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 NPTX2P47972 431 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 IREB2P48200 963 aaKnown RBP18.16■□□□□ 0.5
SAMM50-201ENST00000350028 LONRF2Q1L5Z9 754 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 TRMT1LQ7Z2T5 733 aaKnown RBP18.16■□□□□ 0.5
SAMM50-201ENST00000350028 MAP4K3Q8IVH8 894 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 ANKRD35Q8N283 1001 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 TLR10Q9BXR5 811 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 PDLIM7Q9NR12 457 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 RNF14Q9UBS8 474 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 KCNG1Q9UIX4 513 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 EMSYQ7Z589 1322 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 PTPRFP10586 1907 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 ARID2Q68CP9 1835 aa18.16■□□□□ 0.5
SAMM50-201ENST00000350028 TISP43B9A030 160 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PDE2AO00408 941 aaPredicted RBP18.15■□□□□ 0.5
SAMM50-201ENST00000350028 EVI5O60447 810 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PALMO75781 387 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 SUPT20HL2P0C7V6 817 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 ABCD1P33897 745 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 XKR3Q5GH77 459 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 TREML2Q5T2D2 321 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 MMGT1Q8N4V1 131 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 LMO3Q8TAP4 145 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PACSIN1Q9BY11 444 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 LCTP09848 1927 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PAPPA2Q9BXP8 1791 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 H2AFZP0C0S5 128 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PAFAH1B1P43034 410 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PPATQ06203 517 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 BEND6Q5SZJ8 279 aaPredicted RBP18.15■□□□□ 0.5
SAMM50-201ENST00000350028 CCDC70Q6NSX1 233 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 H2AFVQ71UI9 128 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 CCDC60Q8IWA6 550 aaPredicted RBP18.15■□□□□ 0.5
SAMM50-201ENST00000350028 PROCA1Q8NCQ7 364 aaPredicted RBP18.15■□□□□ 0.5
SAMM50-201ENST00000350028 FUT8Q9BYC5 575 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 USP20Q9Y2K6 914 aa18.15■□□□□ 0.5
SAMM50-201ENST00000350028 A0A0G2JMZ2 1700 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 DENND3A2RUS2 1198 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 ADM5C9JUS6 153 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 H0YCG3 227 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 DDX3XO00571 662 aaKnown RBP eCLIP18.14■□□□□ 0.498e-16■■■■■ 46.7
SAMM50-201ENST00000350028 ATG7O95352 703 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 PLA2G4AP47712 749 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 VSNL1P62760 191 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 DLG4P78352 724 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 PRKCEQ02156 737 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 EPC2Q52LR7 807 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 MEI1Q5TIA1 1274 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 CCDC181Q5TID7 509 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 NFRKBQ6P4R8 1299 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 SLC30A5Q8TAD4 765 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 COG1Q8WTW3 980 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 ATP6V0A4Q9HBG4 840 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 CYP26B1Q9NR63 512 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 BTBD7Q9P203 1132 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 SEPT9Q9UHD8 586 aaPredicted RBP18.14■□□□□ 0.49
SAMM50-201ENST00000350028 IGSF9BQ9UPX0 1349 aa18.14■□□□□ 0.49
SAMM50-201ENST00000350028 A0A0A6YYK5 440 aaPredicted RBP18.13■□□□□ 0.49
SAMM50-201ENST00000350028 CXCL11O14625 94 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 NCK2O43639 380 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 ALDH5A1P51649 535 aaPredicted RBP18.13■□□□□ 0.49
SAMM50-201ENST00000350028 PPP3CAQ08209 521 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 C1orf220Q5T0J3 134 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 PHLDB3Q6NSJ2 640 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 GADL1Q6ZQY3 521 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 BSNDQ8WZ55 320 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 IFT74Q96LB3 600 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 GPR88Q9GZN0 384 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 ABCB6Q9NP58 842 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 DOCK5Q9H7D0 1870 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 OTOFQ9HC10 1997 aa18.13■□□□□ 0.49
SAMM50-201ENST00000350028 A0A0G2JLL6 359 aaPredicted RBP18.12■□□□□ 0.49
SAMM50-201ENST00000350028 ANKRD63C9JTQ0 380 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 CNGA1P29973 690 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 CNTN2Q02246 1040 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 SP4Q02446 784 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 ENPEPQ07075 957 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 HDXQ7Z353 690 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 PRRT2Q7Z6L0 340 aaPredicted RBP18.12■□□□□ 0.49
SAMM50-201ENST00000350028 ERO1BQ86YB8 467 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 U2AF1L4Q8WU68 220 aaKnown RBP18.12■□□□□ 0.49
SAMM50-201ENST00000350028 LMBR1Q8WVP7 490 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 XPNPEP1Q9NQW7 623 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 GRID2IPA4D2P6 1211 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 MAP2K7O14733 419 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 SASH3O75995 380 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 SCP2P22307 547 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 GCLMP48507 274 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 SP2Q02086 613 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 KIF22Q14807 665 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 MSL3Q8N5Y2 521 aaKnown RBP18.12■□□□□ 0.49
SAMM50-201ENST00000350028 SPATA4Q8NEY3 305 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 PLEKHO2Q8TD55 490 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 TMC2Q8TDI7 906 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 CNKSR2Q8WXI2 1034 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 RUBCNQ92622 972 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms