RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TRIM65Q6PJ69 517 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 IL25Q9H293 177 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CYP4F11Q9HBI6 524 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CCDC195A0A1B0GUA6 201 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 PPP1R3GB7ZBB8 358 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 ATP2B4P23634 1241 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 KCTD1Q719H9 257 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 MADDQ8WXG6 1647 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 ING2Q9H160 280 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 NPHS2Q9NP85 383 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 CDC42BPBQ9Y5S2 1711 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 SNX5Q9Y5X3 404 aa19.24■□□□□ 0.67
SMC4-201ENST00000344722 WDR64B1ANS9 1081 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 GOLGA8MH3BSY2 632 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ARL4AP40617 200 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 JAMLQ86YT9 394 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 LRRN4CLQ8ND94 238 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ATP6V0A1Q93050 837 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 TSSK1BQ9BXA7 367 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ANO3Q9BYT9 981 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 FAM129AQ9BZQ8 928 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 UBN1Q9NPG3 1134 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ZNF446Q9NWS9 450 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 BTG4Q9NY30 223 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 PREX2Q70Z35 1606 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 PDHBP11177 359 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 LCA5Q86VQ0 697 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ALKBH8Q96BT7 664 aaKnown RBP19.23■□□□□ 0.67
SMC4-201ENST00000344722 ANKRD36BP1Q96IX9 119 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 HIC2Q96JB3 615 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 C7orf25Q9BPX7 421 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ERP44Q9BS26 406 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 MTO1Q9Y2Z2 717 aaKnown RBP19.23■□□□□ 0.67
SMC4-201ENST00000344722 ENO1P06733 434 aaKnown RBP19.23■□□□□ 0.67
SMC4-201ENST00000344722 USP17L8P0C7I0 530 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 PAPOLAP51003 745 aaKnown RBP19.23■□□□□ 0.67
SMC4-201ENST00000344722 PSMA2P25787 234 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 RHOT1Q8IXI2 618 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 DCLK2Q8N568 766 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 SYN2Q92777 582 aaPredicted RBP19.23■□□□□ 0.67
SMC4-201ENST00000344722 THAP11Q96EK4 314 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 POLR3CQ9BUI4 534 aaPredicted RBP19.23■□□□□ 0.67
SMC4-201ENST00000344722 PHF20Q9BVI0 1012 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 ZWILCHQ9H900 591 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.23■□□□□ 0.674e-34■■■■■ 131.8
SMC4-201ENST00000344722 IL1RAPL1Q9NZN1 696 aa19.23■□□□□ 0.67
SMC4-201ENST00000344722 E9PMD0 336 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 RIBC1Q8N443 379 aaPredicted RBP19.22■□□□□ 0.67
SMC4-201ENST00000344722 GIPC2Q8TF65 315 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 PICK1Q9NRD5 415 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 UBTFL6P0CB48 400 aaPredicted RBP19.22■□□□□ 0.67
SMC4-201ENST00000344722 AP3B2Q13367 1082 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 LAMB3Q13751 1172 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 NLRP10Q86W26 655 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 CCNYQ8ND76 341 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 MDM1Q8TC05 714 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 ARHGEF40Q8TER5 1519 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 E7ENQ6 273 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 FSBPO95073 299 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 AARSP49588 968 aaKnown RBP eCLIP19.22■□□□□ 0.673e-49■■■■■ 252.4
SMC4-201ENST00000344722 TAF1BQ53T94 588 aaPredicted RBP19.22■□□□□ 0.67
SMC4-201ENST00000344722 ERICH1Q86X53 443 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 SLC35G2Q8TBE7 412 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 DYNLL2Q96FJ2 89 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 NDUFA13Q9P0J0 144 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 METP08581 1390 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 RNF103-CHMP3A0A140T963 221 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 O00370 1275 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 SLC16A2P36021 539 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 NEK2P51955 445 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 PPM1NQ8N819 430 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 BARHL2Q9NY43 387 aa19.22■□□□□ 0.67
SMC4-201ENST00000344722 KDSRQ06136 332 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 THOC5Q13769 683 aaKnown RBP19.21■□□□□ 0.67
SMC4-201ENST00000344722 RCSD1Q6JBY9 416 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 GIMAP8Q8ND71 665 aaPredicted RBP19.21■□□□□ 0.67
SMC4-201ENST00000344722 ERGIC2Q96RQ1 377 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 FOXP3Q9BZS1 431 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 NBPF3Q9H094 633 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 MAP2K7O14733 419 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 ALAS1P13196 640 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 OCRLQ01968 901 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 PPP1R18Q6NYC8 613 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 DDX42Q86XP3 938 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMC4-201ENST00000344722 AGPAT1Q99943 283 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 USP11P51784 963 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 TFDP2Q14188 446 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 GRM4Q14833 912 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 PRPF31Q8WWY3 499 aaKnown RBP19.21■□□□□ 0.67
SMC4-201ENST00000344722 ANKS1AQ92625 1134 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 NAF1Q96HR8 494 aaKnown RBP19.21■□□□□ 0.67
SMC4-201ENST00000344722 GNAT1P11488 350 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 PSMC1P62191 440 aaKnown RBP19.21■□□□□ 0.67
SMC4-201ENST00000344722 RNF169Q8NCN4 708 aa19.21■□□□□ 0.67
SMC4-201ENST00000344722 PAPOLBQ9NRJ5 636 aaKnown RBP19.21■□□□□ 0.67
SMC4-201ENST00000344722 SUCLA2Q9P2R7 463 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms