RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 ARHGEF16Q5VV41 709 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 RNF207Q6ZRF8 634 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 PACS2Q86VP3 889 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 NCAPG2Q86XI2 1143 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 HAUS1Q96CS2 278 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 TUBB2BQ9BVA1 445 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 RANBP17Q9H2T7 1088 aaKnown RBP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ANKZF1Q9H8Y5 726 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 HAUS2Q9NVX0 235 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 MAGED2Q9UNF1 606 aaPredicted RBP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 DNM3Q9UQ16 869 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 NFIBO00712 420 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ADCY8P40145 1251 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ECM1Q16610 540 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 ANKRD35Q8N283 1001 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 YIPF3Q9GZM5 350 aa11.29□□□□□ -0.6
CAPRIN1-201ENST00000341394 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 NUGGCQ68CJ6 796 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 SH3RF1Q7Z6J0 888 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ERO1BQ86YB8 467 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 AK8Q96MA6 479 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 MTMR9Q96QG7 549 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 HEMGNQ9BXL5 484 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 CAPN6Q9Y6Q1 641 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZNF536O15090 1300 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 TESPA1A2RU30 521 aaPredicted RBP11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ENO4A6NNW6 628 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 IRF6O14896 467 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 POTEIP0CG38 1075 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 POTEJP0CG39 1038 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 CCNE1P24864 410 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 SARSP49591 514 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ATP11AP98196 1134 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 SLFN12Q8IYM2 578 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 HIPK4Q8NE63 616 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 DDX12PQ92771 950 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 KLHL29Q96CT2 875 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 PURBQ96QR8 312 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 A0A1B0GTH6 734 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 LGALS16A8MUM7 142 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 PRPHP41219 470 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ALKBH5Q6P6C2 394 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 CRYGNQ8WXF5 182 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 CCDC77Q9BR77 488 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 MTUS1Q9ULD2 1270 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 PAPPA2Q9BXP8 1791 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 GAS7O60861 476 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 IRX4P78413 519 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 KCNK18Q7Z418 384 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 CTAGE3PQ8IX95 158 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 C2orf69Q8N8R5 385 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 SPATA20Q8TB22 786 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 TRIM51Q9BSJ1 452 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ALG13Q9NP73 1137 aaKnown RBP11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 ZNF112Q9UJU3 913 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 HPCAL4Q9UM19 191 aa11.28□□□□□ -0.6
CAPRIN1-201ENST00000341394 RBBP6Q7Z6E9 1792 aaKnown RBP11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 FAM86B1E9PN63 330 aa11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 VWA5AO00534 786 aa11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 FAM86B2P0C5J1 330 aa11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 RMDN3Q96TC7 470 aa11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 INTS13Q9NVM9 706 aa11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 L1RE1Q9UN81 338 aa11.27□□□□□ -0.6
CAPRIN1-201ENST00000341394 FDX1P10109 184 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 RPL13P26373 211 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 BAATQ14032 418 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 PPP4R3AQ6IN85 833 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 ZIM3Q96PE6 472 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 SLC38A10Q9HBR0 1119 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 SNCAIPQ9Y6H5 919 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 CELF2O95319 508 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 EEF1GP26641 437 aaKnown RBP11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 DYNLT1P63172 113 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 LRCH2Q5VUJ6 765 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 OPTNQ96CV9 577 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 RPGRIP1Q96KN7 1286 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 ZNF577Q9BSK1 485 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 LRRC27Q9C0I9 530 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 FBXL5Q9UKA1 691 aa11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 TTC7AQ9ULT0 858 aaPredicted RBP11.27□□□□□ -0.61
CAPRIN1-201ENST00000341394 RNF225M0QZC1 329 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 RPS6P62753 249 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 PPP2R5CQ13362 524 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 ORC2Q13416 577 aaPredicted RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 ZRSR2Q15696 482 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 POTEEQ6S8J3 1075 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 MCUR1Q96AQ8 359 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 LENG9Q96B70 501 aa11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
CAPRIN1-201ENST00000341394 TEX13BQ9BXU2 312 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms