RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 UNC45AQ9H3U1 944 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 PRPSAP2O60256 369 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 AOC2O75106 756 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 SLC4A1P02730 911 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 VTNP04004 478 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 VAMP7P51809 220 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 RBP5P82980 135 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 BTBD8Q5XKL5 378 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 CCDC105Q8IYK2 499 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 TNS4Q8IZW8 715 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 NDUFAF2Q8N183 169 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 ANKEF1Q9NU02 776 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 MOSPD1Q9UJG1 213 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 PVALEFA0A1B0GWK0 134 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 KIAA0391O15091 583 aaKnown RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 HEXIM1O94992 359 aaKnown RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 CLCN3P51790 818 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 SLC12A2P55011 1212 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 SKA2Q8WVK7 121 aaPredicted RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 CYP26B1Q9NR63 512 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 TYW1Q9NV66 732 aaKnown RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 TBKBP1A7MCY6 615 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 IKBKEQ14164 716 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 DCAF4L1Q3SXM0 396 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 PARD3BQ8TEW8 1205 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 DONSONQ9NYP3 566 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 HPCAL4Q9UM19 191 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 PLS3P13797 630 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 RAB3IL1Q8TBN0 382 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 MRPL47Q9HD33 250 aaKnown RBP13.81□□□□□ -0.2
LIN54-201ENST00000340417 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
LIN54-201ENST00000340417 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 GRIK4Q16099 956 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 PHLDB2Q86SQ0 1253 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 ZNF579Q8NAF0 562 aaKnown RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 LMBRD1Q9NUN5 540 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 FNDC3AQ9Y2H6 1198 aaKnown RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 RIC1Q4ADV7 1423 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 TBXAS1P24557 533 aaPredicted RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 CDO1Q16878 200 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 NFRKBQ6P4R8 1299 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 VGLL2Q8N8G2 317 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 DPP7Q9UHL4 492 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 SNX9Q9Y5X1 595 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 GIPC1O14908 333 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 PGM5Q15124 567 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 ACCSLQ4AC99 568 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 TMEM270Q6UE05 265 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 CCDC51Q96ER9 411 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 GOLGA6L7A0A1B0GV03 622 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 M0QYV0 167 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 ATP2C1P98194 919 aaPredicted RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 SNX17Q15036 470 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 FAM110CQ1W6H9 321 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 SV2CQ496J9 727 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 XPO4Q9C0E2 1151 aaKnown RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 ANAPC5Q9UJX4 755 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 ESYT2A0FGR8 921 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 H7C4K7 107 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 NMT1P30419 496 aaKnown RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 NPEPPSP55786 919 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 TREML2Q5T2D2 321 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 CXCL17Q6UXB2 119 aa13.8□□□□□ -0.2
LIN54-201ENST00000340417 ZNF512Q96ME7 567 aaPredicted RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 ALDH8A1Q9H2A2 487 aaPredicted RBP13.8□□□□□ -0.2
LIN54-201ENST00000340417 NPHP3-ACAD11A0A0J9YXS1 232 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 ACTN4O43707 911 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 ADKP55263 362 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 PRMT2P55345 433 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 DNAJB3Q8WWF6 145 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 DDX50Q9BQ39 737 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 CCDC68Q9H2F9 335 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 KLK14Q9P0G3 267 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 FZD9O00144 591 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 MOCS3O95396 460 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 ACOT2P49753 483 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 RHBDL3P58872 404 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 THAP9Q9H5L6 903 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 IGFLR1Q9H665 355 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 LTN1O94822 1766 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 APOEP02649 317 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 GHRP10912 638 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 MESDQ14696 234 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 NOLC1Q14978 699 aaKnown RBP eCLIP13.79□□□□□ -0.2
LIN54-201ENST00000340417 MRRFQ96E11 262 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 A1CFQ9NQ94 594 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 UTP11Q9Y3A2 253 aaKnown RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
LIN54-201ENST00000340417 TAL1P17542 331 aaPredicted RBP13.79□□□□□ -0.2
LIN54-201ENST00000340417 CICQ96RK0 1608 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms