RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TPP2P29144 1249 aaPredicted RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 CIITAP33076 1130 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 GPS1Q13098 491 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 SGSM1Q2NKQ1 1148 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 C6orf10Q5SRN2 563 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 KRT39Q6A163 491 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 PLA2G4DQ86XP0 818 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 RAD21L1Q9H4I0 556 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 KRT84Q9NSB2 600 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 ASXL1Q8IXJ9 1541 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 STRNO43815 780 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 SERPIND1P05546 499 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 NR1H3Q13133 447 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 APPL2Q8NEU8 664 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 GLMNQ92990 594 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 MBD2Q9UBB5 411 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 RALGAPBQ86X10 1494 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 FKBP9O95302 570 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 KRT6AP02538 564 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 KRT6BP04259 564 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 TRIM49P0CI25 452 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 TRIM49CP0CI26 452 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 KRT6CP48668 564 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 LRRC41Q15345 812 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 FKBP9P1Q75LS8 142 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 VMP1Q96GC9 406 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 CEP95Q96GE4 821 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 UNC45AQ9H3U1 944 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 SNX24Q9Y343 169 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 STON1Q9Y6Q2 735 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 PALMO75781 387 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 DPCR1Q3MIW9 517 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 GGA1Q9UJY5 639 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 SFI1A8K8P3 1242 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 EIF2S1P05198 315 aaKnown RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 ANXA13P27216 316 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 CEBPAP49715 358 aaPredicted RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 STX3Q13277 289 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 MAPRE2Q15555 327 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 SHROOM1Q2M3G4 852 aaPredicted RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 ALKBH2Q6NS38 261 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 GPR101Q96P66 508 aaPredicted RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 KIF2CQ99661 725 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 KIFC1Q9BW19 673 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 IMPAD1Q9NX62 359 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 FKBP3Q00688 224 aaKnown RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 CYP27A1Q02318 531 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 KRR1Q13601 381 aaKnown RBP13.6□□□□□ -0.23
USP47-202ENST00000339865 MFN1Q8IWA4 741 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 MAGEB5Q9BZ81 275 aa13.6□□□□□ -0.23
USP47-202ENST00000339865 TK2O00142 265 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 CSE1LP55060 971 aaKnown RBP13.59□□□□□ -0.23
USP47-202ENST00000339865 ARMCX4Q5H9R4 360 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 IFNEQ86WN2 208 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 DBNDD2Q9BQY9 259 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 HEMGNQ9BXL5 484 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 CACNA1FO60840 1977 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 RECQLP46063 649 aaPredicted RBP13.59□□□□□ -0.23
USP47-202ENST00000339865 CNGA2Q16280 664 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 KIAA1755Q5JYT7 1200 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 KLHL17Q6TDP4 642 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 ATP8B3O60423 1300 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 AGRPO00253 132 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 DCAF4L1Q3SXM0 396 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 KBTBD3Q8NAB2 608 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 APOA4P06727 396 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 PMS2P54278 862 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 TRIM32Q13049 653 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 C20orf96Q9NUD7 363 aaPredicted RBP13.59□□□□□ -0.23
USP47-202ENST00000339865 PUDPQ08623 228 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 LAMB3Q13751 1172 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 TTC23LQ6PF05 361 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 TAF8Q7Z7C8 310 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 PASD1Q8IV76 773 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 P3H2Q8IVL5 708 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 OR6P1Q8NGX9 317 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 TRIM54Q9BYV2 358 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 FANCEQ9HB96 536 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 ZMYM6O95789 1325 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 BTBD18B2RXH4 712 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 INAQ16352 499 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 KLHL38Q2WGJ6 581 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 DAB2IPQ5VWQ8 1189 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 FBXO11Q86XK2 927 aa13.59□□□□□ -0.23
USP47-202ENST00000339865 LRRC53A6NM62 1247 aa13.58□□□□□ -0.23
USP47-202ENST00000339865 KLRF2D3W0D1 207 aa13.58□□□□□ -0.23
USP47-202ENST00000339865 TAF4O00268 1085 aa13.58□□□□□ -0.23
USP47-202ENST00000339865 ADD1P35611 737 aaKnown RBP13.58□□□□□ -0.23
USP47-202ENST00000339865 CLEC4MQ9H2X3 399 aaPredicted RBP13.58□□□□□ -0.23
USP47-202ENST00000339865 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.23
USP47-202ENST00000339865 MAST3O60307 1309 aa13.58□□□□□ -0.23
USP47-202ENST00000339865 CCT3P49368 545 aaKnown RBP13.58□□□□□ -0.24
USP47-202ENST00000339865 FAM98CQ17RN3 349 aaKnown RBP13.58□□□□□ -0.24
USP47-202ENST00000339865 TTLL7Q6ZT98 887 aa13.58□□□□□ -0.24
USP47-202ENST00000339865 GPBP1L1Q9HC44 474 aaPredicted RBP13.58□□□□□ -0.24
USP47-202ENST00000339865 ZC3H7BQ9UGR2 993 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms