RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 PBX4Q9BYU1 374 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 JPH1Q9HDC5 661 aaPredicted RBP7.2□□□□□ -1.26
SMG1-201ENST00000330588 TBC1D22BQ9NU19 505 aa7.2□□□□□ -1.26
SMG1-201ENST00000330588 BCCIPQ9P287 314 aaKnown RBP eCLIP7.2□□□□□ -1.26
SMG1-201ENST00000330588 COL1A2P08123 1366 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 DOCK5Q9H7D0 1870 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 IGLV3-22A0A075B6J6 115 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 GSTTP1A0A1W2PQM5 241 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 hCG_1642624A0A1W2PR95 340 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 EML1O00423 815 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 POU3F3P20264 500 aaPredicted RBP7.19□□□□□ -1.26
SMG1-201ENST00000330588 ITGB7P26010 798 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 TCF7P36402 384 aaPredicted RBP7.19□□□□□ -1.26
SMG1-201ENST00000330588 TXLNAP40222 546 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 PCBP4P57723 403 aaKnown RBP7.19□□□□□ -1.26
SMG1-201ENST00000330588 SSRP1Q08945 709 aaKnown RBP7.19□□□□□ -1.26
SMG1-201ENST00000330588 GPNMBQ14956 572 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 RSPH3Q86UC2 560 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 RAB11FIP4Q86YS3 637 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 USP38Q8NB14 1042 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 FAM200AQ8TCP9 573 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 RNPEPQ9H4A4 650 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 AGO4Q9HCK5 861 aaKnown RBP7.19□□□□□ -1.26
SMG1-201ENST00000330588 ZNF358Q9NW07 568 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 MARK1Q9P0L2 795 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 CXXC1Q9P0U4 656 aaPredicted RBP7.19□□□□□ -1.26
SMG1-201ENST00000330588 SCN5AQ14524 2016 aa7.19□□□□□ -1.26
SMG1-201ENST00000330588 GBF1Q92538 1859 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 RSPH10B2B2RC85 870 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 KIF28PB7ZC32 967 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 NBNO60934 754 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 ATP9AO75110 1047 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 RSPH10BP0C881 870 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 CPA1P15085 419 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 KCNJ6P48051 423 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 IKBKEQ14164 716 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 PLEKHG4Q58EX7 1191 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 ZNF618Q5T7W0 954 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 ZNF746Q6NUN9 644 aaPredicted RBP7.18□□□□□ -1.26
SMG1-201ENST00000330588 OTOP2Q7RTS6 562 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 SMAP1Q8IYB5 467 aaPredicted RBP7.18□□□□□ -1.26
SMG1-201ENST00000330588 Q8N3U1 123 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMG1-201ENST00000330588 RDM1Q8NG50 284 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 LMBR1Q8WVP7 490 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 RIT2Q99578 217 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 AZI2Q9H6S1 392 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 SLC28A3Q9HAS3 691 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 PDRG1Q9NUG6 133 aa7.18□□□□□ -1.26
SMG1-201ENST00000330588 GPC6Q9Y625 555 aaPredicted RBP7.18□□□□□ -1.26
SMG1-201ENST00000330588 KDM3AQ9Y4C1 1321 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 CYP3A7-CYP3A51PA0A087WV96 503 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 ELOA3CA0A087WX78 387 aaPredicted RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 ELOA3DA6NLF2 546 aaPredicted RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 M0R2N6 131 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 IPO5O00410 1097 aaKnown RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 CPLX1O14810 134 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 DHX15O43143 795 aaKnown RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 HBP1O60381 514 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 PFKFB2O60825 505 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 XBP1P17861 261 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 CYP3A7P24462 503 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 SEC13P55735 322 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 ACTR2P61160 394 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 WDR5P61964 334 aaKnown RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 PPFIA1Q13136 1202 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 ELOA3BQ3SY89 546 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 FAM160B1Q5W0V3 765 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 DEFB128Q7Z7B8 93 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 PLA2G4DQ86XP0 818 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 HERC6Q8IVU3 1022 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 NME8Q8N427 588 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 ELOA3Q8NG57 546 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 WASF1Q92558 559 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 SEPT8Q92599 483 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 NAP1L4Q99733 375 aaKnown RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 SLC26A6Q9BXS9 759 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 FTOQ9C0B1 505 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMG1-201ENST00000330588 BCAS3Q9H6U6 928 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 LMCD1Q9NZU5 365 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 TCEAL9Q9UHQ7 104 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 TUBE1Q9UJT0 475 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 NAP1L2Q9ULW6 460 aaPredicted RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 PCDHA4Q9UN74 947 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 MICAL3Q7RTP6 2002 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 TRIP12Q14669 1992 aaPredicted RBP7.17□□□□□ -1.26
SMG1-201ENST00000330588 PTPRSQ13332 1948 aa7.17□□□□□ -1.26
SMG1-201ENST00000330588 SMIM35A0A1B0GVV1 85 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 FAM86B1E9PN63 330 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 TREHO43280 583 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 GJB5O95377 273 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 FAM86B2P0C5J1 330 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 ARP10275 920 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 FOSL2P15408 326 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 GCFC2P16383 781 aaKnown RBP7.16□□□□□ -1.26
SMG1-201ENST00000330588 SFNP31947 248 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 ZNF76P36508 570 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 THPOP40225 353 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 STAT5BP51692 787 aa7.16□□□□□ -1.26
SMG1-201ENST00000330588 ITGB3BPQ13352 177 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms