RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ZWILCHQ9H900 591 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 SPON1Q9HCB6 807 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 PCSK1NQ9UHG2 260 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 AGO2Q9UKV8 859 aaKnown RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 CD2APQ9Y5K6 639 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 LMO7Q8WWI1 1683 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 BCL9LQ86UU0 1499 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 ADM5C9JUS6 153 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 DAPK3O43293 454 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 CTNND1O60716 968 aaKnown RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 ACSL3O95573 720 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 CCT5P48643 541 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 BACE1P56817 501 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 HERVK_113P62684 666 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 GABPAQ06546 454 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 ORC1Q13415 861 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 KRT39Q6A163 491 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 FRMD5Q7Z6J6 570 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 MSANTD4Q8NCY6 345 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
TOP3A-201ENST00000321105 SNX12Q9UMY4 172 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 RGPD1P0DJD0 1748 aa11.85□□□□□ -0.51
TOP3A-201ENST00000321105 F5H423 210 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-201ENST00000321105 PI4K2BG5E9Z4 385 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 TBX3O15119 743 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 OSBPP22059 807 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 CCDC89Q8N998 374 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 PSPC1Q8WXF1 523 aaKnown RBP11.84□□□□□ -0.51
TOP3A-201ENST00000321105 ERGIC2Q96RQ1 377 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 MLXIPLQ9NP71 852 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 ATRNO75882 1429 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 POC1B-GALNT4F8VUJ3 575 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 RGS16O15492 202 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-201ENST00000321105 SOX5P35711 763 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 IRF2BP1Q8IU81 584 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 ARFGAP2Q8N6H7 521 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 RAB17Q9H0T7 212 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 ITIH6Q6UXX5 1313 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 KCNJ1P48048 391 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 KLHDC7AQ5VTJ3 777 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 C1orf54Q8WWF1 131 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 DHX38Q92620 1227 aaKnown RBP11.84□□□□□ -0.51
TOP3A-201ENST00000321105 HEXIM2Q96MH2 286 aaKnown RBP11.84□□□□□ -0.51
TOP3A-201ENST00000321105 PDCD2LQ9BRP1 358 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 CELF4Q9BZC1 486 aaKnown RBP11.84□□□□□ -0.51
TOP3A-201ENST00000321105 RAB20Q9NX57 234 aa11.84□□□□□ -0.51
TOP3A-201ENST00000321105 ATP9AO75110 1047 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 PON1P27169 355 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 CCNA1P78396 465 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 SH2D3CQ8N5H7 860 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 FBXL13Q8NEE6 735 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 SPIRE2Q8WWL2 714 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 WDR18Q9BV38 432 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 NUP85Q9BW27 656 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 HSD3B7Q9H2F3 369 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 NGRNQ9NPE2 291 aaKnown RBP11.83□□□□□ -0.52
TOP3A-201ENST00000321105 OSGEPQ9NPF4 335 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 ZSCAN5CA6NGD5 496 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-201ENST00000321105 CTIFO43310 598 aaKnown RBP11.83□□□□□ -0.52
TOP3A-201ENST00000321105 STAM2O75886 525 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 WEE2P0C1S8 567 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 ACTR2P61160 394 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 JAG1P78504 1218 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-201ENST00000321105 SLC35G2Q8TBE7 412 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 MTMR8Q96EF0 704 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 APEX2Q9UBZ4 518 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 DMGDHQ9UI17 866 aaKnown RBP11.83□□□□□ -0.52
TOP3A-201ENST00000321105 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 GOLGA8MH3BSY2 632 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 SFNP31947 248 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 PDCLQ13371 301 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 WDR72Q3MJ13 1102 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 SCYL3Q8IZE3 742 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
TOP3A-201ENST00000321105 FAM237AA0A1B0GTK4 181 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 RCCD1A6NED2 376 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 IVLP07476 585 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 PLS3P13797 630 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 ZKSCAN8Q15776 578 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-201ENST00000321105 C10orf76Q5T2E6 689 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 MAP1SQ66K74 1059 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-201ENST00000321105 DNAJC24Q6P3W2 148 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 CATSPER4Q7RTX7 472 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 OR2W6PQ8NHA6 318 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 IPO4Q8TEX9 1081 aaKnown RBP11.82□□□□□ -0.52
TOP3A-201ENST00000321105 SGK1O00141 431 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 EPHB4P54760 987 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 DR1Q01658 176 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 NNTQ13423 1086 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 EDRF1Q3B7T1 1238 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 OR6B2Q6IFH4 312 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 SPOPLQ6IQ16 392 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 TRAPPC12Q8WVT3 735 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 ACSF2Q96CM8 615 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-201ENST00000321105 ANKRD36BP1Q96IX9 119 aa11.82□□□□□ -0.52
TOP3A-201ENST00000321105 MMP19Q99542 508 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms