RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 INTS2Q9H0H0 1204 aaKnown RBP8.24□□□□□ -1.09
IFT88-201ENST00000319980 KMT5AQ9NQR1 393 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 FAM53CQ9NYF3 392 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 APEX2Q9UBZ4 518 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SEPT9Q9UHD8 586 aaPredicted RBP8.24□□□□□ -1.09
IFT88-201ENST00000319980 RAB21Q9UL25 225 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 TBX20Q9UMR3 447 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 HYOU1Q9Y4L1 999 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 MYPNQ86TC9 1320 aa8.24□□□□□ -1.09
IFT88-201ENST00000319980 SPATA31C2B4DYI2 1134 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 IRF6O14896 467 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 LRRN2O75325 713 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 FTCDO95954 541 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PRLRP16471 622 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 TCP1P17987 556 aaKnown RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 CNGA1P29973 690 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 SOX5P35711 763 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 NCKAP1LP55160 1127 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PPP3CAQ08209 521 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PHLDB3Q6NSJ2 640 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 LBX2Q6XYB7 198 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 GADL1Q6ZQY3 521 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 OTUD5Q96G74 571 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ST6GALNAC4Q9H4F1 302 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ABCB6Q9NP58 842 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.23□□□□□ -1.095e-12■■■■■ 96.1
IFT88-201ENST00000319980 SMARCAL1Q9NZC9 954 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 BTBD7Q9P203 1132 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 FAM170AA1A519 330 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 STAM2O75886 525 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 FERP16591 822 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ADSSP30520 456 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 MATR3P43243 847 aaKnown RBP eCLIP8.23□□□□□ -1.09
IFT88-201ENST00000319980 NOP2P46087 812 aaKnown RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 PRKCEQ02156 737 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 C2orf54Q08AI8 447 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CETN1Q12798 172 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CCDC181Q5TID7 509 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 NCAPG2Q86XI2 1143 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CHST13Q8NET6 341 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 BSNDQ8WZ55 320 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 SAAL1Q96ER3 474 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 FUT8Q9BYC5 575 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 SUGCTQ9HAC7 445 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ST7Q9NRC1 585 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PACSIN2Q9UNF0 486 aaPredicted RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 RBBP6Q7Z6E9 1792 aaKnown RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 DOCK1Q14185 1865 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ANKRD63C9JTQ0 380 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 DDX3XO00571 662 aaKnown RBP eCLIP8.23□□□□□ -1.091e-6■■■□□ 16.8
IFT88-201ENST00000319980 DKC1O60832 514 aaKnown RBP eCLIP8.23□□□□□ -1.09
IFT88-201ENST00000319980 ERLIN1O75477 346 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 EIF3JO75822 258 aaKnown RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 DGAT1O75907 488 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 STBD1O95210 358 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 BEND6Q5SZJ8 279 aaPredicted RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 C10orf76Q5T2E6 689 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 MIS18BP1Q6P0N0 1132 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ABHD15Q6UXT9 468 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 MOB2Q70IA6 237 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CBWD2Q8IUF1 395 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 GLYCTKQ8IVS8 523 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 C12orf56Q8IXR9 622 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 SLC17A8Q8NDX2 589 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 LMO3Q8TAP4 145 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ZNF526Q8TF50 670 aaPredicted RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 HNRNPLLQ8WVV9 542 aaKnown RBP8.23□□□□□ -1.09
IFT88-201ENST00000319980 KIFAP3Q92845 792 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CCDC127Q96BQ5 260 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 ZBTB9Q96C00 473 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CLMNQ96JQ2 1002 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 HINFPQ9BQA5 517 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PAGR1Q9BTK6 254 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 CYP26B1Q9NR63 512 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 EHD2Q9NZN4 543 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 EXOC7Q9UPT5 735 aa8.23□□□□□ -1.09
IFT88-201ENST00000319980 PFASO15067 1338 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 NFASCO94856 1347 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 TMCO5BA8MYB1 307 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 ATP8B1O43520 1251 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 SNRNP35Q16560 246 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 MTERF2Q49AM1 385 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 EEPD1Q7L9B9 569 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 MAP4K3Q8IVH8 894 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 SPATA4Q8NEY3 305 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 DNERQ8NFT8 737 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 PLEKHO2Q8TD55 490 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 U2AF1L4Q8WU68 220 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 MS4A14Q96JA4 679 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 NTPCRQ9BSD7 190 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 GPR88Q9GZN0 384 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 GOLPH3Q9H4A6 298 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 UBE2TQ9NPD8 197 aaPredicted RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 PCDHGC5Q9Y5F6 944 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 THSD7BQ9C0I4 1608 aa8.22□□□□□ -1.09
IFT88-201ENST00000319980 FOXN3O00409 490 aaPredicted RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 HNRNPDLO14979 420 aaKnown RBP8.22□□□□□ -1.09
IFT88-201ENST00000319980 TUBBP07437 444 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms