RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 TPX2Q9ULW0 747 aaKnown RBP17.93■□□□□ 0.46
SSH3-201ENST00000308127 SLITRK3O94933 977 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 MYL7Q01449 175 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 TRIP13Q15645 432 aaPredicted RBP17.93■□□□□ 0.46
SSH3-201ENST00000308127 KIAA1755Q5JYT7 1200 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 AGBL2Q5U5Z8 902 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 DUPD1Q68J44 220 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 SH3BP5LQ7L8J4 393 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 CRYGNQ8WXF5 182 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 STK33Q9BYT3 514 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 TMEM150BA6NC51 233 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 SNX1Q13596 522 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 NEK9Q8TD19 979 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 CHMP6Q96FZ7 201 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 PAGR1Q9BTK6 254 aa17.93■□□□□ 0.46
SSH3-201ENST00000308127 GOLGA8IPA6NC78 632 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 GOLGA8JA6NMD2 632 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 BHMG1C9JSJ3 638 aaPredicted RBP17.92■□□□□ 0.46
SSH3-201ENST00000308127 PPEF1O14829 653 aaPredicted RBP17.92■□□□□ 0.46
SSH3-201ENST00000308127 PPFIA2O75334 1257 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 EYA4O95677 639 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 PPP1R7Q15435 360 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 CRY2Q49AN0 593 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 LRCH2Q5VUJ6 765 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 PARP9Q8IXQ6 854 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 TEKT1Q969V4 418 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 FAM118BQ9BPY3 351 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 AGPAT3Q9NRZ7 376 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 RPTORQ8N122 1335 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 KIAA0391O15091 583 aaKnown RBP17.92■□□□□ 0.46
SSH3-201ENST00000308127 RGS16O15492 202 aaPredicted RBP17.92■□□□□ 0.46
SSH3-201ENST00000308127 TMEM253P0C7T8 217 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 LMNB1P20700 586 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 ECE1P42892 770 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 VPS41P49754 854 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 HIBCHQ6NVY1 386 aaPredicted RBP17.92■□□□□ 0.46
SSH3-201ENST00000308127 PRELID2Q8N945 189 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 TCP11Q8WWU5 503 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 PWWP2AQ96N64 755 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 DDX23Q9BUQ8 820 aaKnown RBP17.92■□□□□ 0.46
SSH3-201ENST00000308127 RAB17Q9H0T7 212 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 ADAM7Q9H2U9 754 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 PARVGQ9HBI0 331 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 APEX2Q9UBZ4 518 aa17.92■□□□□ 0.46
SSH3-201ENST00000308127 GOLGA6L10A0A0M3HER8 536 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 PPP1R12BO60237 982 aaPredicted RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 ACSL3O95573 720 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 GH2P01242 217 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 RPSAP08865 295 aaKnown RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 CRKP46108 304 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 C2CD6Q53TS8 623 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 DAB2IPQ5VWQ8 1189 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 MBOAT7Q96N66 472 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 CXorf56Q9H5V9 222 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 BAIAP2L1Q9UHR4 511 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 FRMD4BQ9Y2L6 1034 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 COL24A1Q17RW2 1714 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 A0A1W2PRG0 241 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 PYGMP11217 842 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 COMTP21964 271 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 MAPK7Q13164 816 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 RRP1BQ14684 758 aaKnown RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 LONRF1Q17RB8 773 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 ERMARDQ5T6L9 678 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 HS2ST1Q7LGA3 356 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 PNMA8AQ86V59 439 aaPredicted RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 C1orf131Q8NDD1 294 aaKnown RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 TLCD1Q96CP7 247 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 GRHL1Q9NZI5 618 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 CTNNAL1Q9UBT7 734 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 EMSYQ7Z589 1322 aa17.91■□□□□ 0.46
SSH3-201ENST00000308127 ATXN2Q99700 1313 aaKnown RBP17.91■□□□□ 0.46
SSH3-201ENST00000308127 SLC16A3O15427 465 aaKnown RBP17.9■□□□□ 0.46
SSH3-201ENST00000308127 VCAM1P19320 739 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 SREBF1P36956 1147 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 TNIP1Q15025 636 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 SYDE2Q5VT97 1194 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 SEPT14Q6ZU15 432 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 C1orf186Q6ZWK4 172 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 TBC1D1Q86TI0 1168 aaPredicted RBP17.9■□□□□ 0.46
SSH3-201ENST00000308127 CCDC105Q8IYK2 499 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 FAM129AQ9BZQ8 928 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 A0A0A6YYK5 440 aaPredicted RBP17.9■□□□□ 0.46
SSH3-201ENST00000308127 CHUKO15111 745 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 BBOX1O75936 387 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 SGPL1O95470 568 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 CLTAP09496 248 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 SNCBQ16143 134 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 Q4G0T1 1027 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 EPC2Q52LR7 807 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 CCDC137Q6PK04 289 aaKnown RBP17.9■□□□□ 0.46
SSH3-201ENST00000308127 CCT6BQ92526 530 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 PABPC3Q9H361 631 aaKnown RBP17.9■□□□□ 0.46
SSH3-201ENST00000308127 NRAPQ86VF7 1730 aa17.9■□□□□ 0.46
SSH3-201ENST00000308127 ARP10275 920 aa17.89■□□□□ 0.46
SSH3-201ENST00000308127 PPP3CAQ08209 521 aa17.89■□□□□ 0.46
SSH3-201ENST00000308127 AP3B2Q13367 1082 aa17.89■□□□□ 0.46
SSH3-201ENST00000308127 ANKRD42Q8N9B4 389 aa17.89■□□□□ 0.46
SSH3-201ENST00000308127 C1orf54Q8WWF1 131 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms