RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 ATP1A1P05023 1023 aaKnown RBP10.09□□□□□ -0.79
CLRN1-201ENST00000295911 PSAPP07602 524 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 FERP16591 822 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 TCP1P17987 556 aaKnown RBP10.09□□□□□ -0.79
CLRN1-201ENST00000295911 RFX1P22670 979 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 PRKCIP41743 596 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 FMO5P49326 533 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 SMTNP53814 917 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 GTF2BQ00403 316 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 GFPT1Q06210 699 aaPredicted RBP10.09□□□□□ -0.79
CLRN1-201ENST00000295911 CETN1Q12798 172 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 TMEM132BQ14DG7 1078 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 INTS8Q75QN2 995 aaKnown RBP10.09□□□□□ -0.79
CLRN1-201ENST00000295911 IRF2BP2Q7Z5L9 587 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 CHST13Q8NET6 341 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 ATP6V0A1Q93050 837 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.09□□□□□ -0.79
CLRN1-201ENST00000295911 C17orf75Q9HAS0 396 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 POLD4Q9HCU8 107 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 GCNT4Q9P109 453 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 RAB21Q9UL25 225 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 TFR2Q9UP52 801 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 RIPK3Q9Y572 518 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 DUSP10Q9Y6W6 482 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 A0A0G2JMZ2 1700 aa10.09□□□□□ -0.79
CLRN1-201ENST00000295911 PAPPA2Q9BXP8 1791 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ENC1O14682 589 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 P4HA2O15460 535 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 EXOC3O60645 756 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ATP9AO75110 1047 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ZRANB2O95218 330 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ACTN1P12814 892 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ZSCAN20P17040 1043 aaPredicted RBP10.08□□□□□ -0.8
CLRN1-201ENST00000295911 SCP2P22307 547 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 STAT1P42224 750 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 CYP2J2P51589 502 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 JAM2P57087 298 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ITIH3Q06033 890 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 NAB2Q15742 525 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 IFI16Q16666 785 aaKnown RBP10.08□□□□□ -0.8
CLRN1-201ENST00000295911 GNPTABQ3T906 1256 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 XKR9Q5GH70 373 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 CCDC70Q6NSX1 233 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 HAUS6Q7Z4H7 955 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 FAM133AQ8N9E0 248 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 DNERQ8NFT8 737 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLRN1-201ENST00000295911 KIFAP3Q92845 792 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 STK33Q9BYT3 514 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 SIX2Q9NPC8 291 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 ZNF446Q9NWS9 450 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 CYP39A1Q9NYL5 469 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 RNF14Q9UBS8 474 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 FBXO40Q9UH90 709 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 INTUQ9ULD6 942 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 SNX12Q9UMY4 172 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 OTOFQ9HC10 1997 aa10.08□□□□□ -0.8
CLRN1-201ENST00000295911 SPATA31C2B4DYI2 1134 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 H0YCG3 227 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 BACH1O14867 736 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 PMM2O15305 246 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 USP2O75604 605 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 MOCS3O95396 460 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 CCNE2O96020 404 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 HIRAP54198 1017 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 NCKAP1LP55160 1127 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 MCCD1P59942 119 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 CBX1P83916 185 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 ARID5AQ03989 594 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 BFSP1Q12934 665 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 PRAMEF18Q5VWM3 479 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 CC2D1AQ6P1N0 951 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 ZNF572Q7Z3I7 529 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 XXYLT1Q8NBI6 393 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 NLGN2Q8NFZ4 835 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 CAGE1Q8TC20 777 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 DCPSQ96C86 337 aaKnown RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 WNK4Q96J92 1243 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 NTPCRQ9BSD7 190 aaKnown RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 BCAS3Q9H6U6 928 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 ANKZF1Q9H8Y5 726 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 ADARB2Q9NS39 739 aaKnown RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 HYOU1Q9Y4L1 999 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 CSADQ9Y600 493 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 FHOD1Q9Y613 1164 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 PFASO15067 1338 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 SSC5DA1L4H1 1573 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 A0A087X0T9 212 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 TARSL2A2RTX5 802 aaKnown RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 FAM228BP0C875 321 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 PNMA6AP0CW24 399 aaPredicted RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 KCNA2P16389 499 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 ICAM3P32942 547 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 SOX5P35711 763 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 PAFAH1B1P43034 410 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 VAMP7P51809 220 aa10.07□□□□□ -0.8
CLRN1-201ENST00000295911 NAP1L1P55209 391 aaKnown RBP10.07□□□□□ -0.8
CLRN1-201ENST00000295911 RTP1P59025 263 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms