RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 EML1O00423 815 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 NRG2O14511 850 aaPredicted RBP10.1□□□□□ -0.79
TPM3-201ENST00000271850 MAGEB2O15479 319 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 SLC37A4O43826 429 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 CYP3A7P24462 503 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 GNA11P29992 359 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 MRE11P49959 708 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 VCPP55072 806 aaKnown RBP10.1□□□□□ -0.79
TPM3-201ENST00000271850 TCF15Q12870 199 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 CSPP1Q1MSJ5 1256 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 Q4G0T1 1027 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 KANK3Q6NY19 840 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 LLGL2Q6P1M3 1020 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 BMP8AQ7Z5Y6 402 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 LRRC43Q8N309 656 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 HELQQ8TDG4 1101 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 MICAL1Q8TDZ2 1067 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 LPPQ93052 612 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 FAM167AQ96KS9 214 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 RIT2Q99578 217 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 CDCA3Q99618 268 aaPredicted RBP10.1□□□□□ -0.79
TPM3-201ENST00000271850 NIFKQ9BYG3 293 aaKnown RBP10.1□□□□□ -0.79
TPM3-201ENST00000271850 UPF3BQ9BZI7 483 aaKnown RBP10.1□□□□□ -0.79
TPM3-201ENST00000271850 SMOC2Q9H3U7 446 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 CEP131Q9UPN4 1083 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 VPS13AQ96RL7 3174 aa10.1□□□□□ -0.79
TPM3-201ENST00000271850 C2orf71A6NGG8 1288 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 GAS7O60861 476 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 PDGFBP01127 241 aaPredicted RBP10.09□□□□□ -0.79
TPM3-201ENST00000271850 SP100P23497 879 aaPredicted RBP10.09□□□□□ -0.79
TPM3-201ENST00000271850 TECP42680 631 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 USP11P51784 963 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 AFF1P51825 1210 aaKnown RBP10.09□□□□□ -0.79
TPM3-201ENST00000271850 EARS2Q5JPH6 523 aaKnown RBP10.09□□□□□ -0.79
TPM3-201ENST00000271850 LRCH2Q5VUJ6 765 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 PLA2G4FQ68DD2 849 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 FAM43BQ6ZT52 329 aaPredicted RBP10.09□□□□□ -0.79
TPM3-201ENST00000271850 ANO5Q75V66 913 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 KSR1Q8IVT5 923 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 CCDC12Q8WUD4 166 aaPredicted RBP10.09□□□□□ -0.79
TPM3-201ENST00000271850 AUTS2Q8WXX7 1259 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 PPP2R3CQ969Q6 453 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 ZNF558Q96NG5 402 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 PRKD2Q9BZL6 878 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 AAASQ9NRG9 546 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 GJB4Q9NTQ9 266 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 VAV3Q9UKW4 847 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 SAMM50Q9Y512 469 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 HCFC2Q9Y5Z7 792 aa10.09□□□□□ -0.79
TPM3-201ENST00000271850 A0A087WZ62 844 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 CLASP2O75122 1294 aaKnown RBP10.08□□□□□ -0.8
TPM3-201ENST00000271850 WEE2P0C1S8 567 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 PHKA2P46019 1235 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 JAK3P52333 1124 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 FGD1P98174 961 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 LONRF3Q496Y0 759 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 MTERF2Q49AM1 385 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 ODR4Q5SWX8 454 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 MCTP2Q6DN12 878 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 RUFY3Q7L099 469 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 PACS2Q86VP3 889 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 DAGLBQ8NCG7 672 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 RNF169Q8NCN4 708 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 CCDC148Q8NFR7 591 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 BICD2Q8TD16 824 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 MAP7D2Q96T17 732 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 FDXACB1Q9BRP7 624 aaPredicted RBP10.08□□□□□ -0.8
TPM3-201ENST00000271850 TEKT3Q9BXF9 490 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 ZBP1Q9H171 429 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 KCNH6Q9H252 994 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 POMKQ9H5K3 350 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 MINDY3Q9H8M7 445 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 IFT122Q9HBG6 1241 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 ENTPD7Q9NQZ7 604 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 SH3GLB2Q9NR46 395 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 PCDHA4Q9UN74 947 aa10.08□□□□□ -0.8
TPM3-201ENST00000271850 DENND4AQ7Z401 1863 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 C2CD4DB7Z1M9 353 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 LCE2BO14633 110 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 SFNP31947 248 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 NPEPPSP55786 919 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 BCAR1P56945 870 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 NLRP5P59047 1200 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 SIGLEC14Q08ET2 396 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 PTPN21Q16825 1174 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 INF2Q27J81 1249 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 XKR3Q5GH77 459 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 PDE12Q6L8Q7 609 aaKnown RBP10.07□□□□□ -0.8
TPM3-201ENST00000271850 MIER3Q7Z3K6 550 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 BLIDQ8IZY5 108 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 C12orf76Q8N812 135 aaPredicted RBP10.07□□□□□ -0.8
TPM3-201ENST00000271850 MRPL43Q8N983 215 aaKnown RBP10.07□□□□□ -0.8
TPM3-201ENST00000271850 NLRP7Q8WX94 980 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 HAS1Q92839 578 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 PBXIP1Q96AQ6 731 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 TRAIPQ9BWF2 469 aa10.07□□□□□ -0.8
TPM3-201ENST00000271850 NRDE2Q9H7Z3 1164 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms