RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 GNAT1P11488 350 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 LRRC59Q96AG4 307 aaKnown RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 EMC3Q9P0I2 261 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 IPPQ9Y573 584 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 KRT87PA6NCN2 255 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 GOLGA8RI6L899 631 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 IKBKBO14920 756 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 ASAP2O43150 1006 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 CENPAP49450 140 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 TSC22D1Q15714 1073 aa11.84□□□□□ -0.51
CHFR-201ENST00000266880 KLHL8Q9P2G9 620 aaPredicted RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.84□□□□□ -0.51
CHFR-201ENST00000266880 MYO1DO94832 1006 aa11.83□□□□□ -0.51
CHFR-201ENST00000266880 C4BPBP20851 252 aa11.83□□□□□ -0.51
CHFR-201ENST00000266880 GFPT1Q06210 699 aaPredicted RBP11.83□□□□□ -0.51
CHFR-201ENST00000266880 STXBP2Q15833 593 aa11.83□□□□□ -0.51
CHFR-201ENST00000266880 THAP9Q9H5L6 903 aa11.83□□□□□ -0.51
CHFR-201ENST00000266880 HEY1Q9Y5J3 304 aa11.83□□□□□ -0.51
CHFR-201ENST00000266880 NESP48681 1621 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 CYTH3O43739 400 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 NCAPHQ15003 741 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 SPATA21Q7Z572 469 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 GPR141Q7Z602 305 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 OR8H2Q8N162 312 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 SUCLG2Q96I99 432 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 HIC2Q96JB3 615 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 CUEDC2Q9H467 287 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 SYCP2Q9BX26 1530 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 CDH2P19022 906 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 CLMNQ96JQ2 1002 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 KMT5AQ9NQR1 393 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 MPP6Q9NZW5 540 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 TOMM70O94826 608 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 NUP62P37198 522 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 FAM160B1Q5W0V3 765 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 MARCH10Q8NA82 808 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 EGFL8Q99944 293 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.83□□□□□ -0.524e-18■■■■■ 49.5
CHFR-201ENST00000266880 TUBA8Q9NY65 449 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 SELENONQ9NZV5 590 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 PNMA6EA0A0J9YXQ4 647 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 RCN1Q15293 331 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 MICU2Q8IYU8 434 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 CCDC22O60826 627 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 ATP1A3P13637 1013 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 DSG1Q02413 1049 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 CCDC60Q8IWA6 550 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 AGGF1Q8N302 714 aaeCLIP11.83□□□□□ -0.52
CHFR-201ENST00000266880 PRDM16Q9HAZ2 1276 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 TRIM13O60858 407 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 RAPGEF3O95398 923 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 MYL1P05976 194 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 BRAFP15056 766 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 ZNF211Q13398 564 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 KRT73Q86Y46 540 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 RASGRP4Q8TDF6 673 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 METTL22Q9BUU2 404 aaPredicted RBP11.83□□□□□ -0.52
CHFR-201ENST00000266880 RRM2BQ7LG56 351 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 VPS50Q96JG6 964 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 LRRC4Q9HBW1 653 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 MAPRE2Q15555 327 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 Q3C1V9 767 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 RNF139Q8WU17 664 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.83□□□□□ -0.524e-6■■■■□ 25.1
CHFR-201ENST00000266880 TM6SF1Q9BZW5 370 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 ANAPC7Q9UJX3 599 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 RWDD3Q9Y3V2 267 aa11.83□□□□□ -0.52
CHFR-201ENST00000266880 ZNF233A6NK53 670 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 F8W8V4 182 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 AIM2O14862 343 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ENO3P13929 434 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 RSBN1Q5VWQ0 802 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 CNDP1Q96KN2 507 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 DMAP1Q9NPF5 467 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 MAD2L2Q9UI95 211 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ABCC1P33527 1531 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 MAPRE1Q15691 268 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 ARL13BQ3SXY8 428 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 MORC2Q9Y6X9 1032 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 RNF103O00237 685 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 CAV1Q03135 178 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 ZNF473Q8WTR7 871 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 PPP1R16BQ96T49 567 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 SYBUQ9NX95 663 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 POGZQ7Z3K3 1410 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 GNPATO15228 680 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 TCN1P20061 433 aaPredicted RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 CCND1P24385 295 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 PDIA2Q13087 525 aaKnown RBP11.82□□□□□ -0.52
CHFR-201ENST00000266880 ZBED8Q8IZ13 594 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 PLEKHA8Q96JA3 519 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 GUCA1CO95843 209 aa11.82□□□□□ -0.52
CHFR-201ENST00000266880 PDCD6IPQ8WUM4 868 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms