RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 POTEDQ86YR6 584 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 SYCE1Q8N0S2 351 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 TAB3Q8N5C8 712 aaPredicted RBP10.31□□□□□ -0.76
SIM1-201ENST00000262901 TEX13BQ9BXU2 312 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 MKS1Q9NXB0 559 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 SPATA7Q9P0W8 599 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 TRIM10Q9UDY6 481 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 RABGAP1Q9Y3P9 1069 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 PCDHA13Q9Y5I0 950 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 TTC16Q8NEE8 873 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 TMEM260Q9NX78 707 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 PCDHA6Q9UN73 950 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 PCDHA8Q9Y5H6 950 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 COL4A3BPQ9Y5P4 624 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 CCL15-CCL14A0A0B4J2E2 113 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 SPDYE5A6NIY4 337 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 LAD1O00515 517 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 PLA2G6O60733 806 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 ICAM1P05362 532 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 FCER1AP12319 257 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 MYCLP1P12525 358 aaPredicted RBP10.31□□□□□ -0.76
SIM1-201ENST00000262901 HOXA13P31271 388 aaPredicted RBP10.31□□□□□ -0.76
SIM1-201ENST00000262901 MESDQ14696 234 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 CCL15Q16663 113 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 PREPLQ4J6C6 727 aaPredicted RBP10.31□□□□□ -0.76
SIM1-201ENST00000262901 ARHGEF16Q5VV41 709 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 ARL6IP4Q66PJ3 421 aaKnown RBP10.31□□□□□ -0.76
SIM1-201ENST00000262901 DLK2Q6UY11 383 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 RAD9BQ6WBX8 426 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 RETREG2Q8NC44 543 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 AP1M1Q9BXS5 423 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 UNC45AQ9H3U1 944 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 CUEDC2Q9H467 287 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 NFU1Q9UMS0 254 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.31□□□□□ -0.76
SIM1-201ENST00000262901 TFR2Q9UP52 801 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 GINS2Q9Y248 185 aa10.31□□□□□ -0.76
SIM1-201ENST00000262901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.31□□□□□ -0.76
SIM1-201ENST00000262901 LGALS16A8MUM7 142 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 NCK2O43639 380 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 GFPT2O94808 682 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 DLATP10515 647 aaKnown RBP10.3□□□□□ -0.76
SIM1-201ENST00000262901 VSNL1P62760 191 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 TKFCQ3LXA3 575 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 RNF207Q6ZRF8 634 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 INTS8Q75QN2 995 aaKnown RBP10.3□□□□□ -0.76
SIM1-201ENST00000262901 C14orf80Q86SX3 495 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 SIAH1Q8IUQ4 282 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 B4GALNT2Q8NHY0 566 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 DDX12PQ92771 950 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 KIFAP3Q92845 792 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 IQCDQ96DY2 449 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 CLMNQ96JQ2 1002 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 EMILIN3Q9NT22 766 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 SNCAIPQ9Y6H5 919 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 LAMA4Q16363 1823 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 K7ENM7 598 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 PRPF6O94906 941 aaKnown RBP10.3□□□□□ -0.76
SIM1-201ENST00000262901 TNNI1P19237 187 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 COPB2P35606 906 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 ARHGAP25P42331 645 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 KCTD2Q14681 263 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 DBN1Q16643 649 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 ZNF394Q53GI3 561 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 THEMIS2Q5TEJ8 643 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 TC2NQ8N9U0 490 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 SMC1BQ8NDV3 1235 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 GTF3C2Q8WUA4 911 aaPredicted RBP10.3□□□□□ -0.76
SIM1-201ENST00000262901 THAP9Q9H5L6 903 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.3□□□□□ -0.76
SIM1-201ENST00000262901 ATP8A1Q9Y2Q0 1164 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 PTPN22Q9Y2R2 807 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 GOLGA8KD6RF30 607 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 CD19P15391 556 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 LAMB3Q13751 1172 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 USP33Q8TEY7 942 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 PCIF1Q9H4Z3 704 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 ACAD9Q9H845 621 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 SUGCTQ9HAC7 445 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.3□□□□□ -0.76
SIM1-201ENST00000262901 TUBE1Q9UJT0 475 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 AGTPBP1Q9UPW5 1226 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 TMEM98Q9Y2Y6 226 aa10.3□□□□□ -0.76
SIM1-201ENST00000262901 ZNF189O75820 626 aaPredicted RBP10.29□□□□□ -0.76
SIM1-201ENST00000262901 KRT15P19012 456 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 DSG3P32926 999 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 GJA8P48165 433 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 EPHB4P54760 987 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 ORC2Q13416 577 aaPredicted RBP10.29□□□□□ -0.76
SIM1-201ENST00000262901 NFRKBQ6P4R8 1299 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 VSIG1Q86XK7 387 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 CCDC170Q8IYT3 715 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 TACO1Q9BSH4 297 aaKnown RBP10.29□□□□□ -0.76
SIM1-201ENST00000262901 RAB17Q9H0T7 212 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 PACSIN2Q9UNF0 486 aaPredicted RBP10.29□□□□□ -0.76
SIM1-201ENST00000262901 UNCXA6NJT0 531 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 LRRC53A6NM62 1247 aa10.29□□□□□ -0.76
SIM1-201ENST00000262901 ATP1A1P05023 1023 aaKnown RBP10.29□□□□□ -0.76
SIM1-201ENST00000262901 EIF4BP23588 611 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms