RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 A1CFQ9NQ94 594 aaKnown RBP23.56■■□□□ 1.36
CLN6-201ENST00000249806 CYP39A1Q9NYL5 469 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 GPRC5DQ9NZD1 345 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 TMCO5BA8MYB1 307 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 ANXA13P27216 316 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 TNNT3P45378 269 aaPredicted RBP23.56■■□□□ 1.36
CLN6-201ENST00000249806 OAZ1P54368 228 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 DLK2Q6UY11 383 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 C12orf56Q8IXR9 622 aa23.56■■□□□ 1.36
CLN6-201ENST00000249806 ANKRD63C9JTQ0 380 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 FOXN3O00409 490 aaPredicted RBP23.55■■□□□ 1.36
CLN6-201ENST00000249806 NPTX2P47972 431 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 MAP9Q49MG5 647 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 SWSAP1Q6NVH7 229 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 LRRC57Q8N9N7 239 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 TMEM174Q8WUU8 243 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 TIPINQ9BVW5 301 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 ADSSP30520 456 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 GALCP54803 685 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 MSL3Q8N5Y2 521 aaKnown RBP23.55■■□□□ 1.36
CLN6-201ENST00000249806 TMEM161BQ8NDZ6 487 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 CEP170P1Q96L14 293 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 TEX13BQ9BXU2 312 aa23.55■■□□□ 1.36
CLN6-201ENST00000249806 UBE2TQ9NPD8 197 aaPredicted RBP23.55■■□□□ 1.36
CLN6-201ENST00000249806 MAFGO15525 162 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 EIF3JO75822 258 aaKnown RBP23.54■■□□□ 1.36
CLN6-201ENST00000249806 TPCN2Q8NHX9 752 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 BSNDQ8WZ55 320 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 SENP7Q9BQF6 1050 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 TMOD4Q9NZQ9 345 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 RNF14Q9UBS8 474 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 TBX20Q9UMR3 447 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 AFG3L2Q9Y4W6 797 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 SSC5DA1L4H1 1573 aa23.54■■□□□ 1.36
CLN6-201ENST00000249806 PEX10O60683 326 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 STBD1O95210 358 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 GPS2Q13227 327 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 ARHGEF19Q8IW93 802 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 SYT11Q9BT88 431 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 ACAD9Q9H845 621 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.53■■□□□ 1.365e-7■■■■■ 90.8
CLN6-201ENST00000249806 SPDYE16A6NNV3 312 aaPredicted RBP23.53■■□□□ 1.36
CLN6-201ENST00000249806 KCNK3O14649 394 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 ADRB2P07550 413 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 RPS6KA1Q15418 735 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 CBWD2Q8IUF1 395 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 RDM1Q8NG50 284 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 SAAL1Q96ER3 474 aa23.53■■□□□ 1.36
CLN6-201ENST00000249806 CNGA1P29973 690 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 SMTNP53814 917 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 DMP1Q13316 513 aaPredicted RBP23.52■■□□□ 1.36
CLN6-201ENST00000249806 PALB2Q86YC2 1186 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 CCDC102AQ96A19 550 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 SELENOOQ9BVL4 669 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 PLEKHA4Q9H4M7 779 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 PFASO15067 1338 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 DENND3A2RUS2 1198 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 ATP2A1O14983 1001 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 KIF4AO95239 1232 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 LMNB1P20700 586 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 IFI16Q16666 785 aaKnown RBP23.52■■□□□ 1.36
CLN6-201ENST00000249806 EPC2Q52LR7 807 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 C8orf74Q6P047 294 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 OTUD6AQ7L8S5 288 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 CCDC60Q8IWA6 550 aaPredicted RBP23.52■■□□□ 1.36
CLN6-201ENST00000249806 JPH1Q9HDC5 661 aaPredicted RBP23.52■■□□□ 1.36
CLN6-201ENST00000249806 OSGEPQ9NPF4 335 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 KMT5AQ9NQR1 393 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 HOXC10Q9NYD6 342 aa23.52■■□□□ 1.36
CLN6-201ENST00000249806 CETN1Q12798 172 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 IWS1Q96ST2 819 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 TMEM117Q9H0C3 514 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 SEPT11Q9NVA2 429 aaKnown RBP23.51■■□□□ 1.35
CLN6-201ENST00000249806 TAS2R14Q9NYV8 317 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 STIM2Q9P246 746 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 SLC9A2Q9UBY0 812 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 PRDM4Q9UKN5 801 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 INTUQ9ULD6 942 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 ABCB4P21439 1286 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 FSTL1Q12841 308 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 SNRNP35Q16560 246 aaKnown RBP23.51■■□□□ 1.35
CLN6-201ENST00000249806 TAF4BQ92750 862 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 CCDC127Q96BQ5 260 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 HPCAL4Q9UM19 191 aa23.51■■□□□ 1.35
CLN6-201ENST00000249806 USP2O75604 605 aaPredicted RBP23.5■■□□□ 1.35
CLN6-201ENST00000249806 PSAPP07602 524 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 TNFAIP3P21580 790 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 ACTR2P61160 394 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 SP2Q02086 613 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 MAP4K3Q8IVH8 894 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.5■■□□□ 1.35
CLN6-201ENST00000249806 AENQ8WTP8 325 aaKnown RBP23.5■■□□□ 1.35
CLN6-201ENST00000249806 KAT5Q92993 513 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 ATP6V0A1Q93050 837 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 POP1Q99575 1024 aaKnown RBP23.5■■□□□ 1.35
CLN6-201ENST00000249806 ZHX1Q9UKY1 873 aaPredicted RBP23.5■■□□□ 1.35
CLN6-201ENST00000249806 ADGRA3Q8IWK6 1321 aa23.5■■□□□ 1.35
CLN6-201ENST00000249806 A0A0A6YYK5 440 aaPredicted RBP23.49■■□□□ 1.35
CLN6-201ENST00000249806 PHACTR2O75167 634 aa23.49■■□□□ 1.35
CLN6-201ENST00000249806 SNRPFP62306 86 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms