RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 SUN2Q9UH99 717 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 MROH7-TTC4A0A0A0MT08 1334 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 PVALEFA0A1B0GWK0 134 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 ACAD11Q709F0 780 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 BEST2Q8NFU1 509 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 SNX19Q92543 992 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 N4BP2L2Q92802 583 aaPredicted RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 NRBF2Q96F24 287 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 PCSK1NQ9UHG2 260 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 CYP26B1Q9NR63 512 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 CAPN11Q9UMQ6 739 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 PP2D1A8MPX8 630 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 KRT38O76015 456 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 NOP14P78316 857 aaKnown RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 DRAP1Q14919 205 aaPredicted RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 TMEM259Q4ZIN3 620 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 FSCBQ5H9T9 825 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 TEX2Q8IWB9 1127 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 DCP1AQ9NPI6 582 aaPredicted RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 SCHIP1Q9P0W5 487 aaPredicted RBP19.04■□□□□ 0.64
EXTL3-201ENST00000220562 L3MBTL1Q9Y468 752 aa19.04■□□□□ 0.64
EXTL3-201ENST00000220562 KPNA7A9QM74 516 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 RPS6KA4O75676 772 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 LMNAP02545 664 aaKnown RBP19.03■□□□□ 0.64
EXTL3-201ENST00000220562 TMED1Q13445 227 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 TFDP2Q14188 446 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 SEPT12Q8IYM1 358 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 IP6K2Q9UHH9 426 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 PPP1R12AO14974 1030 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-201ENST00000220562 GNAT1P11488 350 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 ZNF746Q6NUN9 644 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-201ENST00000220562 ST13P4Q8IZP2 240 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-201ENST00000220562 SAAL1Q96ER3 474 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 FAM20AQ96MK3 541 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 EDEM3Q9BZQ6 932 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 MLXIPLQ9NP71 852 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 BARHL2Q9NY43 387 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 HDAC6Q9UBN7 1215 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 GABBR1Q9UBS5 961 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 COL15A1P39059 1388 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 AP1B1Q10567 949 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 TRIML2Q8N7C3 387 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 TOPORSQ9NS56 1045 aaPredicted RBP19.03■□□□□ 0.64
EXTL3-201ENST00000220562 ESRRBO95718 433 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 SPATA17Q96L03 361 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 WRNIP1Q96S55 665 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 CENPKQ9BS16 269 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 MMTAG2Q9BU76 263 aaKnown RBP19.03■□□□□ 0.64
EXTL3-201ENST00000220562 CD209Q9NNX6 404 aa19.03■□□□□ 0.64
EXTL3-201ENST00000220562 TSPY1Q01534 308 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 KRT76Q01546 638 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 TWF2Q6IBS0 349 aaKnown RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 SLITRK6Q9H5Y7 841 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 TBXAS1P24557 533 aaPredicted RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 RNF219Q5W0B1 726 aaPredicted RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 CC2D1AQ6P1N0 951 aaPredicted RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 ZNF668Q96K58 619 aaPredicted RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 TRPV6Q9H1D0 765 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 MBD5Q9P267 1494 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 ANO9A1A5B4 782 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 GRID2IPA4D2P6 1211 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 FTLP02792 175 aaPredicted RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 SZRD1Q7Z422 152 aa19.02■□□□□ 0.64
EXTL3-201ENST00000220562 SCG3Q8WXD2 468 aaKnown RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 POLR3CQ9BUI4 534 aaPredicted RBP19.02■□□□□ 0.64
EXTL3-201ENST00000220562 NME3Q13232 169 aa19.02■□□□□ 0.63
EXTL3-201ENST00000220562 MOSPD1Q9UJG1 213 aa19.02■□□□□ 0.63
EXTL3-201ENST00000220562 HPCAL4Q9UM19 191 aa19.02■□□□□ 0.63
EXTL3-201ENST00000220562 NSUN6Q8TEA1 469 aaKnown RBP19.02■□□□□ 0.63
EXTL3-201ENST00000220562 H0Y3Z8 333 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 P4HBP07237 508 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 ADORA2BP29275 332 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 HNRNPH2P55795 449 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 PSMC1P62191 440 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 GPS1Q13098 491 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 CAPRIN1Q14444 709 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 RGS9BPQ6ZS82 235 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 HNRNPCL2B2RXH8 293 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 HNRNPCL1O60812 293 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 ROR1Q01973 937 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 KIF28PB7ZC32 967 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 ANP32DO95626 131 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 MCF2P10911 925 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 ZC3H18Q86VM9 953 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 LXNQ9BS40 222 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 USP27XA6NNY8 438 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 NR1H3Q13133 447 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 CCDC144BQ3MJ40 725 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 TTC30BQ8N4P2 665 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 FBXO40Q9UH90 709 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 MYBL1P10243 752 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 SMAD1Q15797 465 aaKnown RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 IMPG1Q17R60 797 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 AFG1LQ8WV93 481 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 GCOM2Q9BZD3 368 aaPredicted RBP19.01■□□□□ 0.63
EXTL3-201ENST00000220562 LAMC1P11047 1609 aa19.01■□□□□ 0.63
EXTL3-201ENST00000220562 TEX33O43247 280 aa19■□□□□ 0.63
EXTL3-201ENST00000220562 SFNP31947 248 aa19■□□□□ 0.63
EXTL3-201ENST00000220562 QARSP47897 775 aaKnown RBP19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms