RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 FRMD5Q7Z6J6 570 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 ANKEF1Q9NU02 776 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 CNOT8Q9UFF9 292 aaKnown RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 DAAM1Q9Y4D1 1078 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 MROH1Q8NDA8 1641 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 C17orf102A2RUQ5 167 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 DDTLA6NHG4 134 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 GAS2O43903 313 aaKnown RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 VCAM1P19320 739 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 NNMTP40261 264 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 RWDD2BP57060 319 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 RBP5P82980 135 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 SHC4Q6S5L8 630 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 GLB1LQ6UWU2 654 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 CAPN12Q6ZSI9 719 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 PRMT7Q9NVM4 692 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 HPCAL4Q9UM19 191 aa11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 MAP2P11137 1827 aaKnown RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 POLR1AO95602 1720 aaPredicted RBP11.1□□□□□ -0.63
NIPAL3-201ENST00000003912 ZBED1O96006 694 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 ITGA4P13612 1032 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 NMT1P30419 496 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 GNA15P30679 374 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 SDC4P31431 198 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 ZNF746Q6NUN9 644 aaPredicted RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 TRIM72Q6ZMU5 477 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 RPUSD2Q8IZ73 545 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 BPIFA3Q9BQP9 254 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 CDC23Q9UJX2 597 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 WNT10BO00744 389 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 SLC16A3O15427 465 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 SART1O43290 800 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 PRR29P0C7W0 189 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 SAT1P21673 171 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 MAP7Q14244 749 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 EFCAB12Q6NXP0 572 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 HSPH1Q92598 858 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 PPP1R13BQ96KQ4 1090 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 ZWILCHQ9H900 591 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 BNIP3LO60238 219 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 MFAP3LO75121 409 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 RALAP11233 206 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 STX2P32856 288 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 PPARGP37231 505 aaPredicted RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 PDE1BQ01064 536 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 FKBP1CQ5VVH2 108 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 TEX2Q8IWB9 1127 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 PCSK9Q8NBP7 692 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 MOCS3O95396 460 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 CD4P01730 458 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 RPLP2P05387 115 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 INHBAP08476 426 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 ATP1A3P13637 1013 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 TCF7P36402 384 aaPredicted RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 THOC5Q13769 683 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 TFDP2Q14188 446 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 RPS6KA2Q15349 733 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 DACT2Q5SW24 774 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 TRIM56Q9BRZ2 755 aaKnown RBP11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 TRIM9Q9C026 710 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
NIPAL3-201ENST00000003912 ADORA2BP29275 332 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 GPC5P78333 572 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 SNX1Q13596 522 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 PTPN21Q16825 1174 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 DAGLBQ8NCG7 672 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 RBM41Q96IZ5 413 aaKnown RBP11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 UBN1Q9NPG3 1134 aa11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 MKRN1Q9UHC7 482 aaKnown RBP11.08□□□□□ -0.63
NIPAL3-201ENST00000003912 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 SOWAHDA6NJG2 315 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 DCDC2CA8MYV0 355 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 FTCDO95954 541 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 GSTA1P08263 222 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 GSTA2P09210 222 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 BASP1P80723 227 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 TROAPQ12815 778 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 TMEM132DQ14C87 1099 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 CCDC62Q6P9F0 684 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 TADA2BQ86TJ2 420 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 SPATA2LQ8IUW3 424 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 ANAPC7Q9UJX3 599 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 ENC1O14682 589 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 TJP3O95049 919 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 APOEP02649 317 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 GUCY2DQ02846 1103 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 PPP6R3Q5H9R7 873 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 SDCCAG8Q86SQ7 713 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 PASD1Q8IV76 773 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 ACRBPQ8NEB7 543 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 APPL2Q8NEU8 664 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 GLIS2Q9BZE0 524 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 KIAA1683Q9H0B3 1180 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 HSPBP1Q9NZL4 362 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 OGFRQ9NZT2 677 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 NRBP1Q9UHY1 535 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms