RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Rhobtb3Q9CTN4 611 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Gm10134F6ZQC6 126 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Vmn1r209Q5NC97 312 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Nsmce3Q9CPR8 279 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Grem2O88273 168 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ifnar1P33896 590 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cdc25aP48964 514 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Faf1P54731 649 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ext2P70428 718 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Pcdhgc5Q91XW9 944 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cd2apQ9JLQ0 637 aa18.42■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Nmt1O70310 496 aaKnown RBP18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 KitP05532 979 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Col6a1Q04857 1025 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ankmy2Q3TPE9 440 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 E2f8Q58FA4 860 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Tpd52Q62393 224 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Slc7a14Q8BXR1 771 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Scrn2Q8VCA8 425 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Kdm8Q9CXT6 414 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Robo2Q7TPD3 1470 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 CemipQ8BI06 1361 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Smarca1Q6PGB8 1046 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cnksr2Q80YA9 1032 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ppm1mQ8BU27 406 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Trpm8Q8R4D5 1104 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 CbsQ91WT9 561 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ino80Q6ZPV2 1559 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ifi207E9Q3L4 978 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Fam193bQ3U2K0 892 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Lrrn2Q6PHP6 730 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Q8C6G1 249 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ube2sQ921J4 223 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Sema3eP70275 775 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Tmem109Q3UBX0 243 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Lamc2Q61092 1191 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ptk6Q64434 451 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Dnajc6Q80TZ3 938 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Olfr390Q8VEZ7 311 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 CsadQ9DBE0 493 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Abcg8Q9DBM0 673 aa18.41■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Hsf3D0VYS2 492 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Epha2Q03145 977 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Rcn1Q05186 325 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Wdr41Q3UDP0 460 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Usp38Q8BW70 1042 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Hdac11Q91WA3 347 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 C130060K24RikG3UWA8 416 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Il2P04351 169 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Lzts1P60853 599 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Akap4Q60662 849 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Khdrbs1Q60749 443 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Actl9Q8CG27 415 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Rpa1Q8VEE4 623 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cdk5rap3Q99LM2 503 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Tex9Q9D845 387 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cul4bA2A432 970 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 6030498E09RikB1AX85 169 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Gm10250G3X9L6 160 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Men1O88559 611 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Kcnn2P58390 839 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Znf507Q6ZPY5 941 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Rpf1Q7TND5 349 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Tmem59lQ7TNI2 337 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ddx42Q810A7 929 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Gnl3Q8CI11 538 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Atp5hQ9DCX2 161 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cse1lQ9ERK4 971 aaKnown RBP18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Pja1O55176 578 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Slc12a1P55014 1095 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ttc4Q8R3H9 386 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Psmd9Q9CR00 222 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Ccdc70Q9D9B0 223 aa18.4■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Mst1rQ62190 1378 aa18.39■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Cyp19a1P28649 503 aa18.39■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Lmntd2Q0VET5 664 aa18.39■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Znf219Q6IQX8 726 aa18.39■□□□□ 0.54
Ebf3-204ENSMUST00000169486 Tmem120bQ3TA38 339 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Hif1aQ61221 836 aaKnown RBP18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Znf148Q61624 794 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Krt32Q62168 407 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Ccdc154Q6RUT8 657 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Cwf19l1Q8CI33 537 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Pnpt1Q8K1R3 783 aaKnown RBP18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Ccdc80Q8R2G6 949 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Plod1Q9R0E2 728 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 ArcQ9WV31 396 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Glt1d1A4FUP9 346 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Prl2c3P04768 224 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Cops2P61202 443 aaKnown RBP18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Hnrnph2P70333 449 aaKnown RBP18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 TbataQ7TSD4 393 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Scfd1Q8BRF7 639 aaKnown RBP18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Taf11Q99JX1 211 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Rhobtb1Q9DAK3 695 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Fem1bQ9Z2G0 627 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 C2cd2E9Q3C1 696 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 A430078G23RikE9Q7Y4 484 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Gm3402K7N5P2 326 aa18.39■□□□□ 0.53
Ebf3-204ENSMUST00000169486 Zfp956Q3UZY6 572 aa18.39■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms