RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Vps50Q8CI71 964 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ddx18Q8K363 660 aaKnown RBP9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Rassf7Q9DD19 359 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ulk4Q3V129 1303 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Grin2aP35436 1464 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 1700029H14RikE9PY36 240 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Klc1O88447 541 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Csrnp1P59054 583 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Taf2Q8C176 1104 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Unc45bQ8CGY6 931 aaKnown RBP9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Tnip2Q99JG7 430 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Haus8Q99L00 373 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Tshz2Q68FE9 1030 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Nod1Q8BHB0 953 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 QarsQ8BML9 775 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Rcor2Q8C796 523 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Idh3bQ91VA7 384 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Asap1Q9QWY8 1147 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Card9A2AIV8 536 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Egfl8Q6GUQ1 293 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 NcaphQ8C156 731 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Dbndd2Q9CRD4 158 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Iqcf1Q9D9K8 182 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Rrbp1Q99PL5 1605 aaKnown RBP9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 BC005561E9Q5E2 1589 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Serpina1aP07758 413 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ccdc51Q3URS9 406 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Sfi1Q3UZY0 1216 aaKnown RBP9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Syce1lQ5D525 247 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Smarcal1Q8BJL0 910 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Me3Q8BMF3 604 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Anapc2Q8BZQ7 837 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Slfn2Q9Z0I6 378 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Rps6kb2Q9Z1M4 485 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Sall3Q62255 1320 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 StrnO55106 780 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Eepd1Q3TGW2 569 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Trim43aQ3TL54 445 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Gm3414Q3TNU4 584 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ptk6Q64434 451 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pabpc4Q6PHQ9 660 aaKnown RBP9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Wdr60Q8C761 999 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ttc23Q8CHY7 488 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 B3galt6Q91Z92 325 aa9.87□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Olfr552E9Q545 317 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ctnnd2O35927 1247 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 PolgP54099 1218 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Gspt2Q149F3 632 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Frmd4aQ8BIE6 1020 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Stn1Q8K2X3 378 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ppp1r16bQ8VHQ3 568 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Kctd10Q922M3 315 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Mzt2Q9CQ25 159 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Atp5oQ9DB20 213 aaKnown RBP9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Cyp4f17G3UW78 524 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 C130060K24RikG3UWA8 416 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Lrrc32G3XA59 663 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pcdha4O88689 947 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Hoxb7P09024 217 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 HpcaP84075 193 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Prkab2Q6PAM0 271 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ddx19bQ8BZY3 494 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ccdc80Q8R2G6 949 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Cyp4f16Q99N17 524 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Cbx6Q9DBY5 414 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Arhgef7Q9ES28 862 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Stx7O70439 261 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Fdx1P46656 188 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Foxp1P58462 705 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Kcna4Q61423 654 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Hspa1aQ61696 641 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Tas2r124Q7M718 309 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Lig4Q8BTF7 911 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Lrrc41Q8K1C9 807 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Epsti1Q8VDI1 314 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Zkscan3Q91VW9 553 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 IkbipQ9DBZ1 373 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pola1P33609 1465 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Cav1P49817 178 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Tmprss15P97435 1069 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Oca2Q62052 833 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 GartQ64737 1010 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ulbp1Q8HWA3 334 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Msi2Q920Q6 346 aaKnown RBP9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Sike1Q9CPR7 207 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Chit1Q9D7Q1 464 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Aff4Q9ESC8 1160 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Tcf3P15806 651 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 GclcP97494 637 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Zbtb38Q3LR78 1197 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Znf12Q7TSI0 686 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Usp15Q8R5H1 981 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 TbccQ8VCN9 341 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Nrif2Q921B4 824 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 A0A1Y7VP24 259 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Ccdc127Q3TC33 260 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 FcgrtQ61559 365 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 ThtpaQ8JZL3 224 aa9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pnpt1Q8K1R3 783 aaKnown RBP9.86□□□□□ -0.83
Col6a5-201ENSMUST00000165165 Pard6bQ9JK83 371 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 49.9 ms