RNA–Protein interactions for RNA: ENSMUST00000139443.7

Hmgb1-208, Transcript of High mobility group protein B1, mousemouse

TSL 2 BASIC

Gene Hmgb1, Length 923 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-208ENSMUST00000139443 Skap1Q3UUV5 355 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Ubash3aQ3V3E1 624 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Mbtd1Q6P5G3 631 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Lrrd1Q8C0R9 853 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Fbxl5Q8C2S5 690 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Inpp5fQ8CDA1 1132 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Matr3Q8K310 846 aaKnown RBP17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Cabp7Q91ZM8 215 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Plagl2Q925T4 496 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Fuca2Q99KR8 461 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 QpctQ9CYK2 362 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Pex3Q9QXY9 372 aa17.03■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Col4a6B1AVK5 1691 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Pex10B1AUE5 324 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 1700018F24RikB2RW27 314 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Efna5O08543 228 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 EomesO54839 707 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 EgfP01132 1217 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Camk4P08414 469 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Cacna2d4Q5RJF7 1116 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Kpna1Q60960 538 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Bcar1Q61140 874 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Cd180Q62192 661 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Slc26a2Q62273 739 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Akap7Q7TN79 314 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Olfr1046Q7TR79 316 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Kif2bQ8C0N1 668 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Zfp317Q8C0Q5 607 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Csnk1g3Q8C4X2 424 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Phldb2Q8K1N2 1249 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Trim68Q8K243 485 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Krt79Q8VED5 531 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Noxred1Q9D3S5 366 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Slc26a4Q9R155 780 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Peg12Q9WVA7 283 aa17.02■□□□□ 0.32
Hmgb1-208ENSMUST00000139443 Vmn2r78K7N6U5 853 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Cyp21P03940 487 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Aimp1P31230 310 aaKnown RBP17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Kcnn2P58390 839 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Pkn1P70268 946 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Scarf1Q5ND28 820 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Leo1Q5XJE5 667 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Prpf4bQ61136 1007 aaKnown RBP17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Ccdc66Q6NS45 935 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Vwa2Q70UZ7 791 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Fbxo46Q8BG80 603 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Tmem260Q8BMD6 703 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Cep85Q8BMK0 761 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Acvr1cQ8K348 493 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Kri1Q8VDQ9 704 aaKnown RBP17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Mob2Q8VI63 235 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 TraipQ8VIG6 470 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 PccaQ91ZA3 724 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Armc9Q9D2I5 817 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Olr1Q9EQ09 363 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Plcb1Q9Z1B3 1216 aa17.01■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Kcnt2D3Z649 1135 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Sptbn5F6UCX4 1208 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Kng1O08677 661 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Fgf18O89101 207 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Paxbp1P58501 919 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Arf4P61750 180 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 PrkcbP68404 671 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Mark3Q03141 753 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Tgfbrap1Q3UR70 860 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Cpa2Q504N0 417 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Atp11bQ6DFW5 1175 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Suz12Q80U70 741 aaKnown RBP17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Nol12Q8BG17 217 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Fbxo18Q8K2I9 1042 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Acot11Q8VHQ9 594 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Vps16Q920Q4 839 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Slc12a9Q99MR3 914 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Spg21Q9CQC8 308 aa17■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Piezo2Q8CD54 2822 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Orc4O88708 433 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Stat5aP42230 793 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Nat8lQ3UGX3 299 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 IgflQ6B9Z0 140 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Znf653Q6YND2 615 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 AtripQ8BMG1 785 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Rbm12Q8R4X3 992 aaKnown RBP16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Gdpd2Q9ESM6 539 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Kcnq4Q9JK97 696 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Grb14Q9JLM9 538 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Clic4Q9QYB1 253 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Bcl11aQ9QYE3 773 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Phtf1Q9QZ09 761 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Krt85Q9Z2T6 507 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Gm28036V9GXJ1 658 aa16.99■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Dnah12Q3V0Q1 3086 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Krt78E9Q0F0 1068 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Dsg3O35902 993 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Tpd52l1O54818 204 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Krt18P05784 423 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Smpd1Q04519 627 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Cyb5r4Q3TDX8 528 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Snx25Q3ZT31 840 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 ItgaeQ60677 1167 aa16.98■□□□□ 0.31
Hmgb1-208ENSMUST00000139443 Usp17laQ61068 526 aa16.98■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms