RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Tcf12Q61286 706 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ppp2r5aQ6PD03 486 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 PoliQ6R3M4 717 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Rbm34Q8C5L7 375 aaKnown RBP15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Glis1Q8K1M4 789 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Q9D5Q8 446 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 PpihQ9D868 188 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Kcnq4Q9JK97 696 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Git2Q9JLQ2 708 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 B4galt5Q9JMK0 388 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Tulp1Q9Z273 543 aa15.49■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Trim30bE9PVL6 203 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Zscan29E9Q5B4 869 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Vmn2r78K7N6U5 853 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Casp14O89094 257 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 P01734 135 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Lamp2P17047 415 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 SsbP32067 415 aaKnown RBP15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Yap1P46938 488 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 March9Q3TZ87 348 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Cyp3a11Q64459 504 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Naa35Q6PHQ8 725 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Gpatch3Q8BIY1 525 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Fam78aQ8C552 283 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Rec8Q8C5S7 591 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ppfibp1Q8C8U0 969 aaKnown RBP15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Rpap2Q8VC34 614 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Hnrnpul1Q8VDM6 859 aaKnown RBP15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ccdc96Q9CR92 584 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ears2Q9CXJ1 523 aa15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Atp13a1Q9EPE9 1200 aaKnown RBP15.48■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Rp1l1Q8CGM2 1859 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Cep290Q6A078 2472 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Klhdc7aA2APT9 773 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Fpr-rs4A4FUQ5 323 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Spocd1B1ASB6 936 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Clca3bE9PUL3 1044 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Zfp882E9Q4R4 555 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Nmt1O70310 496 aaKnown RBP15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Tnfaip8l3Q3TBL6 204 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Wdr18Q4VBE8 431 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Cd180Q62192 661 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Kri1Q8VDQ9 704 aaKnown RBP15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ddah1Q9CWS0 285 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Tube1Q9D6T1 475 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Vmn1r65Q9EPS7 332 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Spock2Q9ER58 423 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Pkd2l2Q9JLG4 621 aa15.47■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Cdc27A2A6Q5 825 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Cdr2lA2A6T1 465 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Map7d2A2AG50 781 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Herc3A6H6S0 1050 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ccdc152E9PX14 254 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Vmn2r17E9PYF5 849 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Cyp2b23E9Q593 491 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 EpoP07321 192 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Arf4P61750 180 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Nat8lQ3UGX3 299 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Rsad1Q5SUV1 442 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Aggf1Q7TN31 711 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Dzip3Q7TPV2 1204 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Sh3tc2Q80VA5 1289 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Ercc6lQ8BHK9 1240 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Fam160b1Q8CDM8 764 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Unc93b1Q8VCW4 598 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 B4galt3Q91YY2 395 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Zfp623Q9CY99 499 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Gyg1Q9R062 333 aa15.46■□□□□ 0.07
Ccdc171-204ENSMUST00000126429 Gm45861A0A1B0GRY3 1923 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Kansl3A2RSY1 903 aaKnown RBP15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Gm3739L7N296 216 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Exoc4O35382 975 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Xrcc6P23475 608 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 RabggtbP53612 339 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Ube2hP62257 183 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 PrkcbP68404 671 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Smpd1Q04519 627 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Asprv1Q09PK2 339 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Krt14Q61781 484 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Asic1Q6NXK8 526 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Herc4Q6PAV2 1057 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Smarca1Q6PGB8 1046 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Cep120Q7TSG1 988 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Rexo1Q7TT28 1213 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Tmem220Q8BP07 167 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Ccdc122Q8BVN0 290 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Kcnv1Q8BZN2 503 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Atg13Q91YI1 516 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Snx10Q9CWT3 201 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 PrelpQ9JK53 378 aa15.45■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Lrrc38A2VDH3 298 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Efna5O08543 228 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Clec11aO88200 328 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Znf703P0CL69 594 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Pde6bP23440 856 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Ccnd2P30280 289 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Pcbp1P60335 356 aaKnown RBP15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Gtf2bP62915 316 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 DsppP97399 934 aa15.44■□□□□ 0.06
Ccdc171-204ENSMUST00000126429 Sppl2bQ3TD49 578 aa15.44■□□□□ 0.06
Retrieved 100 of 22,080 RNA–protein pairs in 58.8 ms