RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Drap1Q9D6N5 205 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Trip11E9Q512 1976 aa27.97■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Cops5O35864 334 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Kcnu1O54982 1121 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Lrrc4bP0C192 709 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tcp11Q01755 566 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Mapk6Q61532 720 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Q6PD19 689 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Drc7Q6V3W6 876 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Fbxo44Q8BK26 255 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Vcpip1Q8CDG3 1220 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Phc3Q8CHP6 981 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Spock2Q9ER58 423 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Rilpl1Q9JJC6 406 aa27.96■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Trdmt1O55055 415 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Snx12O70493 165 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Papd7Q6PB75 542 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tmem117Q8BH18 514 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Lin9Q8C735 542 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 N4bp3Q8C7U1 537 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Vps36Q91XD6 386 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Ivns1abpQ920Q8 642 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Rnf6Q9DBU5 667 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Gfpt2Q9Z2Z9 682 aa27.95■■■□□ 2.07
Tpm1-216ENSMUST00000113707 Tnni3P48787 211 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Mtmr10Q7TPM9 771 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Bola2Q8BGS2 86 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Mbtps2Q8CHX6 515 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Sash3Q8K352 380 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Atp2a1Q8R429 994 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Slc12a9Q99MR3 914 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Ergic2Q9CR89 377 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 JmyQ9QXM1 983 aa27.95■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Clca3bE9PUL3 1044 aa27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Serpinb3aG3X9V8 387 aa27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Nck2O55033 380 aa27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Fmr1P35922 614 aaKnown RBP27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Muc3aQ3U5A2 218 aa27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Hyou1Q9JKR6 999 aaKnown RBP27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Adgrf5G5E8Q8 1348 aa27.94■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Gm45261A0A1B0GSP6 197 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Gm7086A0A1W2P766 342 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Ece2Q80Z60 881 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Plcb4Q91UZ1 1175 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Hdhd5Q91WM2 419 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Zfp623Q9CY99 499 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Hic1Q9R1Y5 733 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Skor2A7M7C7 1008 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Pdzrn4E9PUZ9 1014 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Emc10Q3TAS6 258 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Tcaf1Q8BNE1 924 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Lrrc57Q9D1G5 239 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 PrameQ9D4Z5 464 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Smco2Q9DA21 347 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Eif4e3Q9DBB5 207 aa27.93■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Osbpl7A2A716 963 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Rsrc2A2RTL5 376 aaKnown RBP27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 DtnbO70585 659 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Wnt7bP28047 349 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Tbx3P70324 741 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Rnf180Q3U827 592 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Wdr18Q4VBE8 431 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Tsr1Q5SWD9 803 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Mkrn3Q60764 544 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Klhl11Q8CE33 709 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Olfr395Q8VGR3 312 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Smc1bQ920F6 1248 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Xpo5Q924C1 1204 aaKnown RBP27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Sar1bQ9CQC9 198 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Katnbl1Q9CWJ3 299 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 1700016D06RikQ9DAA5 166 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Arih1Q9Z1K5 555 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Robo3Q9Z2I4 1366 aa27.92■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Nhej1Q3KNJ2 295 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Acot5Q6Q2Z6 421 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Trmt10bQ9D075 318 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Snx29Q9D3S3 818 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Usp29Q9ES63 869 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Gyg1Q9R062 333 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Arrdc4A0A0B4J1F4 415 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Mmrn2A6H6E2 943 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Map2k1P31938 393 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Pla2g4aP47713 748 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Tgfbrap1Q3UR70 860 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Asap3Q5U464 904 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 ItgaeQ60677 1167 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Cln3Q61124 438 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Ubap2lQ80X50 1107 aaKnown RBP27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Snip1Q8BIZ6 383 aaKnown RBP27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Psmd5Q8BJY1 504 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Prpf31Q8CCF0 499 aaKnown RBP27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Mamdc2Q8CG85 686 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Dnajc17Q91WT4 303 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Tmem206Q9D771 350 aa27.91■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Unc13dB2RUP2 1085 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Gm10110D3Z5M2 615 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Mt-CybP00158 381 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Q3TTJ4 293 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Arhgap1Q5FWK3 439 aa27.9■■■□□ 2.06
Tpm1-216ENSMUST00000113707 Nudt16Q6P3D0 195 aa27.9■■■□□ 2.06
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms