RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ccnyl1D3YUJ3 367 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Slc35g2D3YVE8 412 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gm28043E0CXC2 719 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Aoc3O70423 765 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gja8P28236 440 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Dynlt1P51807 113 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 FcgrtQ61559 365 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 PdxkQ8K183 312 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cpa5Q8R4H4 436 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cse1lQ9ERK4 971 aaKnown RBP16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Lmtk3Q5XJV6 1424 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Map2P20357 1828 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ttc13A0A1L1SSC7 844 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Flvcr1B2RXV4 560 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Runx2Q08775 607 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Vav2Q60992 868 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Adck2Q6NSR3 617 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cabs1Q8C633 391 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Calhm6Q8C9E8 313 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tlr3Q99MB1 905 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 RpainQ9CWY9 219 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Extl2Q9ES89 330 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 MagohP61327 146 aaKnown RBP16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tshz2Q68FE9 1030 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Zkscan3Q91VW9 553 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Pomgnt1Q91X88 660 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 MagohbQ9CQL1 146 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Caln1Q9JJG7 219 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Usp31E9Q6Y8 1344 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Adgra3Q7TT36 1310 aa16.61■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rasa2P58069 847 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Wdr27Q8C5V5 780 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 CgasQ8C6L5 507 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Shisa4Q8CA71 197 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gbp5Q8CFB4 590 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ranbp17Q99NF8 1088 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Med7Q9CZB6 233 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ddx24Q9ESV0 857 aaKnown RBP16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rfwd2Q9R1A8 733 aaKnown RBP16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mtmr1Q9Z2C4 669 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Syngap1F6SEU4 1340 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Adgrb1Q3UHD1 1582 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ptpn12P35831 775 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 SpidrQ8BGX7 933 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Trim66Q924W6 1242 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Psmd6Q99JI4 389 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Trpm3Q5F4S9 1721 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mucl2P02815 138 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Trim72Q1XH17 477 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Foxd4Q60688 444 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 TwistnbQ78WZ7 330 aaKnown RBP16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Supt20hQ7TT00 530 aaKnown RBP16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Fbxo28Q8BIG4 368 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ppm1kQ8BXN7 372 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Trim47Q8C0E3 641 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Nemp2Q8CB65 421 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Oxnad1Q8VE38 311 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Bap1Q99PU7 728 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Stx12Q9ER00 274 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ric1Q69ZJ7 1422 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Casp8O89110 480 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 StamP70297 548 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 HdxQ14B70 692 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Fam49aQ8BHZ0 323 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Abhd8Q8R0P8 439 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cog1Q9Z160 980 aa16.6■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cep85lA0A1W2P884 806 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 DffaO54786 331 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 YwhagP61982 247 aaKnown RBP16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ptpn14Q62130 1189 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Adat2Q6P6J0 191 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Vipas39Q8BGQ1 491 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Psmd5Q8BJY1 504 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cox16Q9CR63 106 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tmed2Q9R0Q3 201 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Plcg1Q62077 1302 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Rsrc2A2RTL5 376 aaKnown RBP16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Prr18Q6PAN7 307 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Pih1h3bQ8C6P5 218 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Nr3c2Q8VII8 978 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Capn9Q9D805 690 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 PpihQ9D868 188 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gm6657A0A1B0GRJ3 277 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Gm1758F6VZZ1 202 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cnot7Q60809 285 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tbc1d1Q60949 1255 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Pip5kl1Q6U7H8 395 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mindy1Q76LS9 468 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Stkld1Q80YS9 662 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Slc7a14Q8BXR1 771 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Pramef12Q9D2F1 463 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Tmtc1Q3UV71 942 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Kif11Q6P9P6 1052 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Fbxo44Q8BK26 255 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 L3mbtl3Q8BLB7 883 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Ero1aQ8R180 464 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Med24Q99K74 987 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Cpb2Q9JHH6 422 aa16.59■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Mboat4P0C7A3 435 aa16.58■□□□□ 0.25
Ccdc88b-201ENSMUST00000113440 Klra9Q2TJJ8 266 aa16.58■□□□□ 0.25
Retrieved 100 of 22,080 RNA–protein pairs in 43.2 ms