RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 E2f7Q6S7F2 904 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 HomezQ80W88 542 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ddx10Q80Y44 875 aaKnown RBP13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Usp20Q8C6M1 916 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 GanQ8CA72 597 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Pcdha7Q91Y13 937 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 BrdtQ91Y44 956 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ier5lQ99J55 406 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Tmem206Q9D771 350 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 PorcnQ9JJJ7 461 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Nudt5Q9JKX6 218 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Tnfsf13bQ9WU72 309 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 Trip11E9Q512 1976 aa13.57□□□□□ -0.24
Trim50-202ENSMUST00000111180 DohhA0A1Y7VJ29 135 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ccnd2P30280 289 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Sox5P35710 763 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ppm1aP49443 382 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 DmpkP54265 631 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Specc1lQ2KN98 1118 aaKnown RBP13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Xkr5Q5GH66 676 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Sema5bQ60519 1093 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Znf280dQ68FE8 974 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Srd5a1Q68FF9 255 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Xpnpep1Q6P1B1 623 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Abcf1Q6P542 837 aaKnown RBP13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Gemin4Q6P6L6 1058 aaKnown RBP13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 PodnQ7TQ62 611 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 6820408C15RikQ8BJX2 354 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Traf3ip3Q8C0G2 513 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ccdc15Q8C9M2 810 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Bbs7Q8K2G4 715 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Slc14a1Q8VHL0 384 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Acot11Q8VHQ9 594 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Prmt7Q922X9 692 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 MutyhQ99P21 515 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ino80bQ99PT3 375 aaKnown RBP13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Atp6ap2Q9CYN9 350 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Phf14Q9D4H9 881 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Cmtr1Q9DBC3 837 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Add1Q9QYC0 735 aaKnown RBP13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 AmfrQ9R049 643 aa13.56□□□□□ -0.24
Trim50-202ENSMUST00000111180 Wdr78E9PYY5 807 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Svs3aF2Z472 265 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Gm3383J3QQ59 259 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Apba3O88888 571 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ogfod1Q3U0K8 545 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Oog4Q4G0C7 502 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Cdc37Q61081 379 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Dhx37Q6NZL1 1150 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Actn1Q7TPR4 892 aaKnown RBP13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ca12Q8CI85 354 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Upb1Q8VC97 393 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Olfr395Q8VGR3 312 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Trpv6Q91WD2 767 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 CutaQ9CQ89 177 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ccdc96Q9CR92 584 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ccdc94Q9D6J3 314 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ccdc89Q9DA73 370 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Mettl7bQ9DD20 244 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ank3G5E8K5 1961 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Smim10l2aA0A0B4J1F8 78 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Fam124aD3Z5V4 536 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Gm10378F6XQQ1 160 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 PfkmP47857 780 aaKnown RBP13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Tnni3P48787 211 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Bach2P97303 839 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 DeptorQ570Y9 409 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Fam183bQ5NC57 135 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Nab2Q61127 525 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ano6Q6P9J9 911 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Acot5Q6Q2Z6 421 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 TbataQ7TSD4 393 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Sgms1Q8VCQ6 419 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Rbm10Q99KG3 930 aaKnown RBP13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ears2Q9CXJ1 523 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ttyh1Q9D3A9 450 aa13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Gys1Q9Z1E4 738 aaKnown RBP13.55□□□□□ -0.24
Trim50-202ENSMUST00000111180 Serpinb3aG3X9V8 387 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Dnm2P39054 870 aaKnown RBP13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Tpm1P58771 284 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Mgat3Q10470 538 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Icam5Q60625 917 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 FcgrtQ61559 365 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Amer1Q7TS75 1132 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Cyp4f39Q8BGU0 532 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 SucoQ8C341 1250 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 ClmnQ8C5W0 1052 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ppfibp1Q8C8U0 969 aaKnown RBP13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Reep2Q8VCD6 254 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Slc5a4aQ9ET37 656 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Trpm5Q9JJH7 1158 aa13.54□□□□□ -0.24
Trim50-202ENSMUST00000111180 Myo5aQ99104 1853 aaKnown RBP13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 DgkhD3YXJ0 1156 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 Prl2c3P04768 224 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 EpoP07321 192 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 Pbx1P41778 430 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 Ccr1P51675 355 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 Adcy7P51829 1099 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 LxnP70202 222 aa13.53□□□□□ -0.24
Trim50-202ENSMUST00000111180 Tfdp1Q08639 410 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms