RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Cyp2ab1S4R196 498 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Mtcl1Q3UHU5 1945 aa20.53■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Barx2O08686 283 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Flot1O08917 428 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Terf1P70371 421 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Atp13a4Q5XF90 1193 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Nell2Q61220 819 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Lrrc4cQ8C031 640 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Pabpc6Q9D4E6 643 aaKnown RBP20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Vmn2r77L7N2B7 854 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Trmt1Q3TX08 663 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Ms4a5Q810P8 197 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gcfc2Q8BKT3 769 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Fam20aQ8CID3 541 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Rassf9Q8K342 435 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Fam111aQ9D2L9 613 aa20.52■□□□□ 0.88
Ccdc50-201ENSMUST00000039443 Gm4297D3YWB7 211 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Tnfrsf11aO35305 625 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Casp8O89110 480 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Ppp1r13bQ62415 1087 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Uts2bQ765I1 113 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Tmc4Q7TQ65 694 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 BC048507Q80ZS7 89 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Hook3Q8BUK6 718 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Zcchc8Q9CYA6 709 aaKnown RBP20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Tmem174Q9DCX7 243 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Grk1Q9WVL4 564 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Cfap221A9Q751 836 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 6030498E09RikB1AX85 169 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gpr161B2RPY5 545 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Zfp266E9Q2S7 604 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Rab21P35282 222 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Casp4P70343 373 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Fbln1Q08879 705 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Rnf113a2Q14B01 337 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Znf354cQ571J5 560 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Kiaa1211Q5PR69 1207 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 E2f7Q6S7F2 904 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Camkk2Q8C078 588 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Plcg2Q8CIH5 1265 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Yipf1Q91VU1 306 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gmcl1Q920G9 524 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Mcur1Q9CXD6 340 aa20.51■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm15262A0A140LIQ5 728 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 1700003F12RikA2AKE5 210 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm5814J3QP80 125 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Fgfr4Q03142 799 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Znf18Q810A1 556 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Lin9Q8C735 542 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 ItpkaQ8R071 459 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Ttc1Q91Z38 292 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Mrfap1Q9CQL7 125 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Chchd3Q9CRB9 227 aaKnown RBP20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 4930449I24RikQ9D5E3 319 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Serpina9Q9D7D2 418 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Q9DAQ4 598 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Xab2Q9DCD2 855 aaKnown RBP20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Rtn3Q9ES97 964 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Phtf1Q9QZ09 761 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Mta2Q9R190 668 aa20.5■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Skor2A7M7C7 1008 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Mms22lB1AUR6 1238 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm8994E9PV04 411 aaKnown RBP20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Rap1gds1E9Q912 607 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm3127E9Q9P5 263 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gimap9G3X987 291 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm3453K7N724 263 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Krt12Q64291 487 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Zbtb7bQ64321 544 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gimap4Q99JY3 219 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Olfr247E9PVJ7 320 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Magea4F2Z493 315 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Olfr819K7N727 320 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Casp14O89094 257 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 SkiQ60698 725 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Ppp2r5cQ60996 524 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Lamc2Q61092 1191 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Ssxb10Q6XAR7 170 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Rccd1Q8BTU7 377 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Coa7Q921H9 231 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Fam205aA2APU8 1308 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Astn1Q61137 1302 aa20.49■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Nup62clA2AG10 272 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm4907B1AXB9 411 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Kcnk16G5E845 292 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Gm8298J3QPI0 401 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Slc3a2P10852 526 aaKnown RBP20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Mrpl11Q9CQF0 192 aaKnown RBP20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Usp17lbE9Q9U0 468 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Calb1P12658 261 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 GcP21614 476 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 OatP29758 439 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Ttc39dQ0VF76 604 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Q3UTZ3 580 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Scarf1Q5ND28 820 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Plk4Q64702 925 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Slc9a9Q8BZ00 644 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Lmo3Q8BZL8 145 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Rell1Q8K2J7 272 aa20.48■□□□□ 0.87
Ccdc50-201ENSMUST00000039443 Znf830Q8R1N0 363 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms