RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 TbataQ7TSD4 393 aa19.68■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ddx42Q810A7 929 aaKnown RBP19.68■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Pdia6Q922R8 440 aaKnown RBP19.68■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ms4a5Q810P8 197 aa19.68■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Strip1Q8C079 837 aa19.68■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Cmtr1Q9DBC3 837 aa19.68■□□□□ 0.74
Ebf3-201ENSMUST00000033378 MaddQ80U28 1577 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 PtprmP28828 1452 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Gm20721E9Q2U8 318 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Nrg3O35181 713 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Tfdp1Q08639 410 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Nsun7Q14AW5 724 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Tdpoz4Q6YCH2 370 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Prkag3Q8BGM7 489 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Anapc5Q8BTZ4 740 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Actl9Q8CG27 415 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ttc1Q91Z38 292 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Tex9Q9D845 387 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Riok3Q9DBU3 519 aaKnown RBP19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Akap4Q60662 849 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Fam53cQ8BXQ8 393 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Card9A2AIV8 536 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Tmem120bQ3TA38 339 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ttbk2Q3UVR3 1243 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ddx3xQ62167 662 aaKnown RBP19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ahcyl2Q68FL4 613 aaKnown RBP19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Cwf19l1Q8CI33 537 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Setd3Q91WC0 594 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Mad2l2Q9D752 211 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Frmd7A2AD83 703 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Lrrc63A6H694 637 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Rcn1Q05186 325 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Myo19Q5SV80 963 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Hsph1Q61699 858 aaKnown RBP19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Prkab1Q9R078 270 aa19.67■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Gm6657A0A1B0GRJ3 277 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Cul4bA2A432 970 aaKnown RBP19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Col6a1Q04857 1025 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Pacsin1Q61644 441 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Gramd1bQ80TI0 738 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Trip10Q8CJ53 603 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Nrbf2Q8VCQ3 287 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 C1qbpO35658 278 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Trim35Q8C006 501 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Eps8l2Q99K30 729 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ap2b1Q9DBG3 937 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ahdc1Q6PAL7 1594 aaKnown RBP19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Serpinb3cA2RSF9 386 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Eddm13E9Q7F5 164 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Tal1P22091 329 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Lmntd2Q0VET5 664 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ints2Q80UK8 1198 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Tmtc4Q8BG19 741 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Akr1c14Q91WT7 323 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Rpa3Q9CQ71 121 aa19.66■□□□□ 0.74
Ebf3-201ENSMUST00000033378 MtrrQ8C1A3 696 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Eya4Q9Z191 616 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Dnmt1P13864 1620 aaKnown RBP19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Mcf2A2AEU1 1111 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Trim5E9PV98 497 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 PhexP70669 749 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Gbp10Q000W5 611 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ankmy2Q3TPE9 440 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Krt26Q3TRJ4 462 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Serpinb3dQ6UKZ0 387 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Q8C6G1 249 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Dclre1bQ8C7W7 541 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ttc33Q9D6K7 262 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Rbm6S4R1W5 1118 aaKnown RBP19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ccdc85cE9Q6B2 420 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Npdc1Q64322 332 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Dync1li2Q6PDL0 492 aaKnown RBP19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Rpa1Q8VEE4 623 aaKnown RBP19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 GsnP13020 780 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Kcnn2P58390 839 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Ppp1r13lQ5I1X5 824 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Pla2g4cQ64GA5 597 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Mysm1Q69Z66 819 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Phactr3Q8BYK5 558 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Nudcd3Q8R1N4 363 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Pspc1Q8R326 523 aaKnown RBP19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Fgd4Q91ZT5 766 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Fem1bQ9Z2G0 627 aa19.65■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Zc3h7bF8VPP8 982 aaKnown RBP19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 InhbeO08717 350 aa19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Shc3Q61120 474 aa19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Wdr91Q7TMQ7 748 aa19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Kctd3Q8BFX3 815 aa19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Adprhl2Q8CG72 370 aa19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Uchl3Q9JKB1 230 aa19.64■□□□□ 0.74
Ebf3-201ENSMUST00000033378 Sin3bQ62141 1098 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Prdm4Q80V63 803 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Ccdc80Q8R2G6 949 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 PlvapQ91VC4 438 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 FtcdQ91XD4 541 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Ints5Q8CHT3 1018 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Trub2Q91WG3 331 aaKnown RBP19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Igf2bp3Q9CPN8 579 aaKnown RBP19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Ing2Q9ESK4 281 aa19.64■□□□□ 0.73
Ebf3-201ENSMUST00000033378 Lrrc38A2VDH3 298 aa19.64■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms