RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Mipol1Q9D9F8 279 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tjap1Q9DCD5 539 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Edf1Q9JMG1 148 aaKnown RBP17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Pagr1bF6V0H0 108 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gspt2Q149F3 632 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Adad1Q5SUE7 619 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Acad11Q80XL6 779 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tmem39bQ810L4 492 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 F11Q91Y47 624 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Pagr1aQ99L02 253 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Nudt5Q9JKX6 218 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tll2Q9WVM6 1012 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ubr3Q5U430 1889 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Slc6a16A0A1L1SR47 742 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Fam71aB7XG49 585 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gm2030D3Z7C4 212 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 TyrobpO54885 114 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Klra5Q60652 266 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Nell2Q61220 819 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Zdhhc24Q6IR37 284 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Vat1lQ80TB8 417 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Nop53Q8BK35 484 aaKnown RBP17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Neto2Q8BNJ6 525 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Gle1Q8R322 699 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ces1fQ91WU0 561 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tom1l1Q923U0 474 aa17.47■□□□□ 0.39
Trim28-201ENSMUST00000005705 Adam7O35227 789 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Atg4cQ811C2 458 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Depdc1aQ8CIG0 804 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Sdr42e1Q9D665 394 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Kiaa1522A2A7S8 1013 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 UncxO08934 530 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Mt-CybP00158 381 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Cd68P31996 326 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Zic5Q7TQ40 622 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Tmc4Q7TQ65 694 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ttc7aQ8BGB2 858 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Usp20Q8C6M1 916 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ccdc137Q8R0K4 290 aaKnown RBP17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Ggt5Q9Z2A9 573 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Scn9aQ62205 1984 aa17.46■□□□□ 0.39
Trim28-201ENSMUST00000005705 Pja1O55176 578 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Mmp14P53690 582 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 AaasP58742 546 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Sorbs1Q62417 1290 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Prr18Q6PAN7 307 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Stkld1Q80YS9 662 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gpr180Q8BPS4 441 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 MslnlQ8C160 685 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Vps52Q8C754 723 aaKnown RBP17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Nup58Q8R332 587 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Togaram1Q6A070 1776 aaKnown RBP17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ephb4P54761 987 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Psmc4P54775 418 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 R3hdm4Q4VBF2 262 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Trim37Q6PCX9 961 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 SpopQ6ZWS8 374 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Btbd6Q8K2J9 488 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rabgef1Q9JM13 491 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Znf804aA2AKY4 1200 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ccdc152E9PX14 254 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Senp6Q6P7W0 1132 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Epn2Q8CHU3 595 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Abcf3Q8K268 709 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ctage5Q8R311 779 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Col5a2Q3U962 1497 aa17.45■□□□□ 0.38
Trim28-201ENSMUST00000005705 Trappc11B2RXC1 1133 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Creb1Q01147 341 aaKnown RBP17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Epha7Q61772 998 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ythdf3Q8BYK6 585 aaKnown RBP17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 SucoQ8C341 1250 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Riox2Q8CD15 465 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Defb15Q8R2I5 79 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Bst2Q8R2Q8 172 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Mageb16Q9CWV4 363 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Flt1P35969 1333 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Msh3P13705 1091 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 RcvrnP34057 202 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Vars2Q3U2A8 1060 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Sin3bQ62141 1098 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ano5Q75UR0 904 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Ttc8Q8VD72 515 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 IqcdQ9D3V1 458 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 4931423N10RikQ9D4J9 382 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Tlr2Q9QUN7 784 aa17.44■□□□□ 0.38
Trim28-201ENSMUST00000005705 Serpinb6eI7HJI3 429 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Rpl13P47963 211 aaKnown RBP17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 FdxrQ61578 494 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Mcf2lQ64096 1149 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gpr156Q6PCP7 798 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Kctd6Q8BNL5 237 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gprc5cQ8K3J9 440 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Med24Q99K74 987 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Q9D2Q3 444 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Sh2b2Q9JID9 621 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Lamb1P02469 1786 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Pitpnm2Q6ZPQ6 1335 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Olfr552E9Q545 317 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Gna14P30677 355 aa17.43■□□□□ 0.38
Trim28-201ENSMUST00000005705 Atp13a3Q5XF89 1219 aa17.43■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms