RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J Q0144Q9ZZW2 109 aa4.93□□□□□ -1.62
HSX1tR(CCU)J CTA1P15202 515 aa4.92□□□□□ -1.62
HSX1tR(CCU)J PDX1P16451 410 aa4.92□□□□□ -1.62
HSX1tR(CCU)J UTR1P21373 530 aa4.92□□□□□ -1.62
HSX1tR(CCU)J BUD5P25300 642 aaPredicted RBP4.92□□□□□ -1.62
HSX1tR(CCU)J ERG9P29704 444 aa4.92□□□□□ -1.62
HSX1tR(CCU)J YEF1P32622 495 aa4.92□□□□□ -1.62
HSX1tR(CCU)J BCK2P33306 851 aa4.92□□□□□ -1.62
HSX1tR(CCU)J LHS1P36016 881 aa4.92□□□□□ -1.62
HSX1tR(CCU)J YKL077WP36081 392 aa4.92□□□□□ -1.62
HSX1tR(CCU)J YKL071WP36086 256 aa4.92□□□□□ -1.62
HSX1tR(CCU)J YBR285WP38354 144 aa4.92□□□□□ -1.62
HSX1tR(CCU)J NAB3P38996 802 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
HSX1tR(CCU)J GDI1P39958 451 aaKnown RBP4.92□□□□□ -1.62
HSX1tR(CCU)J RRG9P40156 214 aa4.92□□□□□ -1.62
HSX1tR(CCU)J STB1P42845 420 aa4.92□□□□□ -1.62
HSX1tR(CCU)J OGG1P53397 376 aaPredicted RBP4.92□□□□□ -1.62
HSX1tR(CCU)J YNR062CP53748 327 aa4.92□□□□□ -1.62
HSX1tR(CCU)J COS1P53822 381 aa4.92□□□□□ -1.62
HSX1tR(CCU)J SCS7Q03529 384 aa4.92□□□□□ -1.62
HSX1tR(CCU)J SMP3Q04174 516 aa4.92□□□□□ -1.62
HSX1tR(CCU)J ELP6Q04868 273 aa4.92□□□□□ -1.62
HSX1tR(CCU)J HRI1Q05905 244 aaKnown RBP4.92□□□□□ -1.62
HSX1tR(CCU)J GAS2Q06135 555 aa4.92□□□□□ -1.62
HSX1tR(CCU)J IRC19Q07843 230 aa4.92□□□□□ -1.62
HSX1tR(CCU)J RDL2Q08742 149 aaKnown RBP4.92□□□□□ -1.62
HSX1tR(CCU)J BTS1Q12051 335 aa4.92□□□□□ -1.62
HSX1tR(CCU)J SIA1Q12212 622 aa4.92□□□□□ -1.62
HSX1tR(CCU)J YOR343CQ12484 108 aa4.92□□□□□ -1.62
HSX1tR(CCU)J MHF1Q3E835 90 aa4.92□□□□□ -1.62
HSX1tR(CCU)J TPK3P05986 398 aa4.91□□□□□ -1.62
HSX1tR(CCU)J CBP6P07253 162 aaPredicted RBP4.91□□□□□ -1.62
HSX1tR(CCU)J PEP4P07267 405 aaKnown RBP4.91□□□□□ -1.62
HSX1tR(CCU)J SNF6P18888 332 aa4.91□□□□□ -1.62
HSX1tR(CCU)J APD1P38281 316 aa4.91□□□□□ -1.62
HSX1tR(CCU)J MED8P38304 223 aa4.91□□□□□ -1.62
HSX1tR(CCU)J MGE1P38523 228 aa4.91□□□□□ -1.62
HSX1tR(CCU)J SBE22P38814 852 aa4.91□□□□□ -1.62
HSX1tR(CCU)J SHO1P40073 367 aa4.91□□□□□ -1.62
HSX1tR(CCU)J YGR066CP53242 292 aa4.91□□□□□ -1.62
HSX1tR(CCU)J SOK2P53438 785 aaPredicted RBP4.91□□□□□ -1.62
HSX1tR(CCU)J SNF12P53628 566 aa4.91□□□□□ -1.62
HSX1tR(CCU)J TFB3Q03290 321 aa4.91□□□□□ -1.62
HSX1tR(CCU)J DML1Q03652 475 aa4.91□□□□□ -1.62
HSX1tR(CCU)J VBA4Q04602 768 aaKnown RBP4.91□□□□□ -1.62
HSX1tR(CCU)J SNO4Q04902 237 aa4.91□□□□□ -1.62
HSX1tR(CCU)J RSA3Q05942 220 aaKnown RBP4.91□□□□□ -1.62
HSX1tR(CCU)J FMP45Q07651 309 aa4.91□□□□□ -1.62
HSX1tR(CCU)J HSP33Q08914 237 aaKnown RBP4.91□□□□□ -1.62
HSX1tR(CCU)J UIP4Q08926 304 aa4.91□□□□□ -1.62
HSX1tR(CCU)J YPL191CQ08930 360 aa4.91□□□□□ -1.62
HSX1tR(CCU)J HSP32Q08992 237 aa4.91□□□□□ -1.62
HSX1tR(CCU)J YAL064W-BO13512 126 aa4.9□□□□□ -1.63
HSX1tR(CCU)J RPL43AP0CX25 92 aaKnown RBP4.9□□□□□ -1.63
HSX1tR(CCU)J RPL43BP0CX26 92 aa4.9□□□□□ -1.63
HSX1tR(CCU)J STE12P13574 688 aa4.9□□□□□ -1.63
HSX1tR(CCU)J RPB8P20436 146 aa4.9□□□□□ -1.63
HSX1tR(CCU)J MDH2P22133 377 aa4.9□□□□□ -1.63
HSX1tR(CCU)J PRP28P23394 588 aa4.9□□□□□ -1.63
HSX1tR(CCU)J PRE2P30656 287 aaKnown RBP4.9□□□□□ -1.63
HSX1tR(CCU)J CHK1P38147 527 aa4.9□□□□□ -1.63
HSX1tR(CCU)J YMR262WP38430 313 aa4.9□□□□□ -1.63
HSX1tR(CCU)J FET3P38993 636 aa4.9□□□□□ -1.63
HSX1tR(CCU)J RFC4P40339 323 aaKnown RBP4.9□□□□□ -1.63
HSX1tR(CCU)J QRI7P43122 407 aa4.9□□□□□ -1.63
HSX1tR(CCU)J YGR126WP53274 230 aa4.9□□□□□ -1.63
HSX1tR(CCU)J HOT1Q03213 719 aa4.9□□□□□ -1.63
HSX1tR(CCU)J SPC19Q03954 165 aa4.9□□□□□ -1.63
HSX1tR(CCU)J YLR352WQ06479 807 aa4.9□□□□□ -1.63
HSX1tR(CCU)J YPR147CQ06522 304 aaKnown RBP4.9□□□□□ -1.63
HSX1tR(CCU)J YOR289WQ12012 251 aaPredicted RBP4.9□□□□□ -1.63
HSX1tR(CCU)J YDL007C-AQ2V2Q0 85 aa4.9□□□□□ -1.63
HSX1tR(CCU)J SAM35P14693 329 aa4.89□□□□□ -1.63
HSX1tR(CCU)J PTC6P25646 442 aa4.89□□□□□ -1.63
HSX1tR(CCU)J THI4P32318 326 aa4.89□□□□□ -1.63
HSX1tR(CCU)J OAC1P32332 324 aa4.89□□□□□ -1.63
HSX1tR(CCU)J PRP21P32524 280 aaPredicted RBP4.89□□□□□ -1.63
HSX1tR(CCU)J SSE2P32590 693 aaKnown RBP4.89□□□□□ -1.63
HSX1tR(CCU)J PAD1P33751 242 aaKnown RBP RIP-Chip data4.89□□□□□ -1.63not detected
HSX1tR(CCU)J RTC2P38279 296 aa4.89□□□□□ -1.63
HSX1tR(CCU)J ARN2P38724 620 aa4.89□□□□□ -1.63
HSX1tR(CCU)J YLF2P38746 405 aa4.89□□□□□ -1.63
HSX1tR(CCU)J EGD2P38879 174 aaKnown RBP4.89□□□□□ -1.63
HSX1tR(CCU)J CHL4P38907 458 aa4.89□□□□□ -1.63
HSX1tR(CCU)J MLH1P38920 769 aa4.89□□□□□ -1.63
HSX1tR(CCU)J SOP4P39543 234 aaPredicted RBP4.89□□□□□ -1.63
HSX1tR(CCU)J YER184CP39961 794 aa4.89□□□□□ -1.63
HSX1tR(CCU)J ZRG8P40021 1076 aa4.89□□□□□ -1.63
HSX1tR(CCU)J XBP1P40489 647 aa4.89□□□□□ -1.63
HSX1tR(CCU)J POP1P41812 875 aa4.89□□□□□ -1.63
HSX1tR(CCU)J SWP82P43554 623 aa4.89□□□□□ -1.63
HSX1tR(CCU)J IRC7P43623 340 aa4.89□□□□□ -1.63
HSX1tR(CCU)J MSY1P48527 492 aa4.89□□□□□ -1.63
HSX1tR(CCU)J PLB2Q03674 706 aa4.89□□□□□ -1.63
HSX1tR(CCU)J YMD8Q03697 442 aa4.89□□□□□ -1.63
HSX1tR(CCU)J OST6Q03723 332 aa4.89□□□□□ -1.63
HSX1tR(CCU)J YLR345WQ06137 509 aa4.89□□□□□ -1.63
HSX1tR(CCU)J EMG1Q06287 252 aaKnown RBP4.89□□□□□ -1.63
HSX1tR(CCU)J YPQ2Q06328 317 aa4.89□□□□□ -1.63
HSX1tR(CCU)J NIP7Q08962 181 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms