RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 RAD10P06838 210 aa-1.18□□□□□ -2.6
snR38snR38 YHL044WP38727 235 aa-1.18□□□□□ -2.6
snR38snR38 YDR089WP38966 869 aa-1.18□□□□□ -2.6
snR38snR38 AVT2P39981 480 aa-1.18□□□□□ -2.6
snR38snR38 ATM1P40416 690 aa-1.18□□□□□ -2.6
snR38snR38 MET18P40469 1032 aa-1.18□□□□□ -2.6
snR38snR38 CAB4P53332 305 aa-1.18□□□□□ -2.6
snR38snR38 AAH1P53909 347 aa-1.18□□□□□ -2.6
snR38snR38 ACT1P60010 375 aaKnown RBP-1.18□□□□□ -2.6
snR38snR38 SCS7Q03529 384 aa-1.18□□□□□ -2.6
snR38snR38 NAT4Q04751 285 aa-1.18□□□□□ -2.6
snR38snR38 SNT309Q06091 175 aaPredicted RBP-1.18□□□□□ -2.6
snR38snR38 FMP49A0A023PZB3 126 aa-1.19□□□□□ -2.6
snR38snR38 RPS14AP06367 137 aaKnown RBP-1.19□□□□□ -2.6
snR38snR38 DSF1P0CX08 502 aa-1.19□□□□□ -2.6
snR38snR38 YNR073CP0CX09 502 aa-1.19□□□□□ -2.6
snR38snR38 PPH22P23595 377 aa-1.19□□□□□ -2.6
snR38snR38 DOA1P36037 715 aa-1.19□□□□□ -2.6
snR38snR38 PCH2P38126 564 aa-1.19□□□□□ -2.6
snR38snR38 MNL1P38888 796 aa-1.19□□□□□ -2.6
snR38snR38 RPS14BP39516 138 aaKnown RBP-1.19□□□□□ -2.6
snR38snR38 PES4P39684 611 aa-1.19□□□□□ -2.6
snR38snR38 ERO1Q03103 563 aa-1.19□□□□□ -2.6
snR38snR38 CTS2Q06350 511 aa-1.19□□□□□ -2.6
snR38snR38 YLH47Q06493 454 aa-1.19□□□□□ -2.6
snR38snR38 ALE1Q08548 619 aa-1.19□□□□□ -2.6
snR38snR38 ATG29Q12092 213 aa-1.19□□□□□ -2.6
snR38snR38 VAM3Q12241 283 aa-1.19□□□□□ -2.6
snR38snR38 AGC1Q12482 902 aa-1.19□□□□□ -2.6
snR38snR38 GFD2P25370 566 aaKnown RBP-1.2□□□□□ -2.6
snR38snR38 NIP1P32497 812 aaKnown RBP-1.2□□□□□ -2.6
snR38snR38 NTC20P38302 140 aaPredicted RBP-1.2□□□□□ -2.6
snR38snR38 STE24P47154 453 aa-1.2□□□□□ -2.6
snR38snR38 ERG25P53045 309 aa-1.2□□□□□ -2.6
snR38snR38 DUO1P53168 247 aaKnown RBP-1.2□□□□□ -2.6
snR38snR38 RRN9P53437 365 aa-1.2□□□□□ -2.6
snR38snR38 RRP45Q05636 305 aaKnown RBP-1.2□□□□□ -2.6
snR38snR38 RUP1Q12242 671 aa-1.2□□□□□ -2.6
snR38snR38 ATP4P05626 244 aa-1.21□□□□□ -2.6
snR38snR38 ARF1P11076 181 aaKnown RBP-1.21□□□□□ -2.6
snR38snR38 SCM4P32564 187 aa-1.21□□□□□ -2.6
snR38snR38 BYE1P36106 594 aa-1.21□□□□□ -2.6
snR38snR38 SRP72P38688 640 aaKnown RBP-1.21□□□□□ -2.6
snR38snR38 SUR7P54003 302 aa-1.21□□□□□ -2.6
snR38snR38 DON1Q05610 365 aa-1.21□□□□□ -2.6
snR38snR38 VTA1Q06263 330 aa-1.21□□□□□ -2.6
snR38snR38 LCL2Q08045 131 aa-1.21□□□□□ -2.6
snR38snR38 GLE1Q12315 538 aa-1.21□□□□□ -2.6
snR38snR38 RAS2P01120 322 aaKnown RBP-1.22□□□□□ -2.6
snR38snR38 QCR8P08525 94 aa-1.22□□□□□ -2.6
snR38snR38 NOP4P37838 685 aaKnown RBP-1.22□□□□□ -2.6
snR38snR38 SIF2P38262 535 aa-1.22□□□□□ -2.6
snR38snR38 OTU2P38747 307 aaKnown RBP-1.22□□□□□ -2.6
snR38snR38 DSE1P40077 573 aa-1.22□□□□□ -2.6
snR38snR38 SOK1P40317 901 aa-1.22□□□□□ -2.6
snR38snR38 MET28P40573 187 aa-1.22□□□□□ -2.6
snR38snR38 MNP1P53163 194 aaPredicted RBP-1.22□□□□□ -2.6
snR38snR38 OSH6Q02201 448 aa-1.22□□□□□ -2.6
snR38snR38 SIL1Q08199 421 aa-1.22□□□□□ -2.6
snR38snR38 YPL162CQ12042 273 aa-1.22□□□□□ -2.6
snR38snR38 ISA2Q12425 185 aa-1.22□□□□□ -2.6
snR38snR38 CDC21P06785 304 aa-1.23□□□□□ -2.61
snR38snR38 AAC3P18238 307 aa-1.23□□□□□ -2.61
snR38snR38 HXT2P23585 541 aa-1.23□□□□□ -2.61
snR38snR38 UGX2P32772 223 aa-1.23□□□□□ -2.61
snR38snR38 ZTA1P38230 334 aaKnown RBP-1.23□□□□□ -2.61
snR38snR38 MBA1P38300 278 aa-1.23□□□□□ -2.61
snR38snR38 SAP185P40856 1058 aa-1.23□□□□□ -2.61
snR38snR38 CAK1P43568 368 aaPredicted RBP-1.23□□□□□ -2.61
snR38snR38 COS5P47187 383 aa-1.23□□□□□ -2.61
snR38snR38 GTR1Q00582 310 aa-1.23□□□□□ -2.61
snR38snR38 PRP3Q03338 469 aaPredicted RBP-1.23□□□□□ -2.61
snR38snR38 TRM82Q03774 444 aa-1.23□□□□□ -2.61
snR38snR38 RQC1Q05468 723 aaKnown RBP-1.23□□□□□ -2.61
snR38snR38 COS7Q07788 383 aa-1.23□□□□□ -2.61
snR38snR38 MHT1Q12525 324 aa-1.23□□□□□ -2.61
snR38snR38 RPL3P14126 387 aaKnown RBP-1.24□□□□□ -2.61
snR38snR38 SCL1P21243 252 aaKnown RBP-1.24□□□□□ -2.61
snR38snR38 MRPL8P22353 238 aa-1.24□□□□□ -2.61
snR38snR38 PTH2P34222 208 aa-1.24□□□□□ -2.61
snR38snR38 RRN3P36070 627 aa-1.24□□□□□ -2.61
snR38snR38 TIF34P40217 347 aaKnown RBP-1.24□□□□□ -2.61
snR38snR38 EFM4P40516 257 aa-1.24□□□□□ -2.61
snR38snR38 YNL320WP42840 284 aa-1.24□□□□□ -2.61
snR38snR38 SKO1Q02100 647 aa-1.24□□□□□ -2.61
snR38snR38 ARC18Q05933 178 aaKnown RBP-1.24□□□□□ -2.61
snR38snR38 MEU1Q07938 337 aaKnown RBP RIP-Chip data-1.24□□□□□ -2.61not detected
snR38snR38 YOR268CQ08734 132 aa-1.24□□□□□ -2.61
snR38snR38 PRM3Q08931 133 aa-1.24□□□□□ -2.61
snR38snR38 MRPL23Q12487 163 aaPredicted RBP-1.24□□□□□ -2.61
snR38snR38 SAS5Q99314 248 aa-1.24□□□□□ -2.61
snR38snR38 NUP157P40064 1391 aaKnown RBP-1.24□□□□□ -2.61
snR38snR38 MHP1P43638 1398 aa-1.24□□□□□ -2.61
snR38snR38 CLC1P17891 233 aa-1.25□□□□□ -2.61
snR38snR38 STP22P25604 385 aa-1.25□□□□□ -2.61
snR38snR38 RPL16BP26785 198 aaKnown RBP-1.25□□□□□ -2.61
snR38snR38 PEX4P29340 183 aa-1.25□□□□□ -2.61
snR38snR38 VPH2P32341 215 aa-1.25□□□□□ -2.61
snR38snR38 SPL2P38839 148 aa-1.25□□□□□ -2.61
snR38snR38 RIO2P40160 425 aaKnown RBP-1.25□□□□□ -2.61
Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms