RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	TY1B-GR2	Q12269	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-OL	Q12273	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-PL	Q12414	1755 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	SAL1	D6W196	494 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	RPS23A	P0CX29	145 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	RPS23B	P0CX30	145 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	FUS3	P16892	353 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	MRPL8	P22353	238 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	MXR2	P25566	168 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	CIN8	P27895	1000 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	MKK1	P32490	508 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	VAM7	P32912	316 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	AST1	P35183	429 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	SMF2	P38778	549 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	YIL059C	P40520	121 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	YNL320W	P42840	284 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	HIT1	P46973	164 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	CPR7	P47103	393 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	MPS2	P53159	387 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	NFI1	Q12216	726 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	SRN2	Q99176	213 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	UBA3	Q99344	299 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	RAD1	P06777	1100 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	UBA1	P22515	1024 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	GRR1	P24814	1151 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	CYM1	P32898	989 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	GGC1	P38988	300 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	LSG1	P53145	640 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	TPC1	P53257	314 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	CWC22	P53333	577 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	ZRG17	P53735	605 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	YNR068C	P53754	272 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	IGO1	P53897	168 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	UTP15	Q04305	513 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	APC5	Q08683	685 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	RPN6	Q12377	434 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	SPO24	Q3E752	67 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	SAG1	P20840	650 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	RPB9	P27999	122 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	FAA1	P30624	700 aa	Known RBP	0.59	□□□□□ -2.31
SEC8	YPR055W	ZIP1	P31111	875 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
SEC8	YPR055W	MRPS5	P33759	307 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	RBG1	P39729	369 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	JEM1	P40358	645 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	FMP48	P53233	369 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	INP2	Q03824	705 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	BNI1	P41832	1953 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	STE2	D6VTK4	431 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	RPL6B	P05739	176 aa	Known RBP	0.59	□□□□□ -2.31
SEC8	YPR055W	MAS1	P10507	462 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	HXT2	P23585	541 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	URA10	P30402	227 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	ZRT3	P34240	503 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	YKL071W	P36086	256 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	LAS1	P36146	502 aa	Predicted RBP	0.59	□□□□□ -2.31
SEC8	YPR055W	FRM2	P37261	193 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	IST2	P38250	946 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	YFR018C	P43599	363 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	RPL6A	Q02326	176 aa	Known RBP	0.59	□□□□□ -2.31
SEC8	YPR055W	YMR310C	Q04867	317 aa	Predicted RBP	0.59	□□□□□ -2.31
SEC8	YPR055W	FAR10	Q06001	478 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	YFH1	Q07540	174 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	MIM1	Q08176	113 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	LDB17	Q12342	491 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	HIF1	Q12373	385 aa		0.59	□□□□□ -2.31
SEC8	YPR055W	TRM3	Q07527	1436 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	MHP1	P43638	1398 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	MYO3	P36006	1272 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	TRR2	P38816	342 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	LCP5	P40079	357 aa	Predicted RBP	0.59	□□□□□ -2.32
SEC8	YPR055W	UFE1	P41834	346 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	ASG7	P46993	209 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	EFM3	P47163	339 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	PRM1	P53835	661 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	YDR018C	Q12185	396 aa		0.59	□□□□□ -2.32
SEC8	YPR055W	MLP2	P40457	1679 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	CPT1	P17898	393 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	POT1	P27796	417 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
SEC8	YPR055W	IME2	P32581	645 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	PEX5	P35056	612 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	YKR015C	P36111	568 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	SHE3	P38272	425 aa	Known RBP	0.58	□□□□□ -2.32
SEC8	YPR055W	YHC3	P47040	408 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	NAS6	P50086	228 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	CUE3	P53137	624 aa	Known RBP	0.58	□□□□□ -2.32
SEC8	YPR055W	YNL143C	P53908	130 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	DIA1	P54005	336 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	SED5	Q01590	340 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	ECM19	Q06011	112 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	NUP188	P52593	1655 aa	Known RBP	0.58	□□□□□ -2.32
SEC8	YPR055W	CAT8	P39113	1433 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	YLL053C	P0CD98	152 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	ARF2	P19146	181 aa	Known RBP	0.58	□□□□□ -2.32
SEC8	YPR055W	PET8	P38921	284 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	ALP1	P38971	573 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	YIR035C	P40579	254 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	HRT1	Q08273	121 aa		0.58	□□□□□ -2.32
SEC8	YPR055W	STU1	P38198	1513 aa		0.58	□□□□□ -2.32

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms