RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YGR018CP53211 109 aa3.7□□□□□ -1.82
VPS28YPL065W HCH1P53834 153 aa3.7□□□□□ -1.82
VPS28YPL065W RMI1Q02685 241 aa3.7□□□□□ -1.82
VPS28YPL065W MRX11Q03079 207 aa3.7□□□□□ -1.82
VPS28YPL065W PSK1P31374 1356 aa3.7□□□□□ -1.82
VPS28YPL065W SPS100P13130 326 aa3.69□□□□□ -1.82
VPS28YPL065W RBK1P25332 333 aa3.69□□□□□ -1.82
VPS28YPL065W URA10P30402 227 aa3.69□□□□□ -1.82
VPS28YPL065W MRP21P38175 177 aa3.69□□□□□ -1.82
VPS28YPL065W RRF1P38771 230 aa3.69□□□□□ -1.82
VPS28YPL065W FET3P38993 636 aa3.69□□□□□ -1.82
VPS28YPL065W MKC7P53379 596 aa3.69□□□□□ -1.82
VPS28YPL065W REP1P03871 373 aa3.68□□□□□ -1.82
VPS28YPL065W ACB1P31787 87 aa3.68□□□□□ -1.82
VPS28YPL065W ECT1P33412 323 aa3.68□□□□□ -1.82
VPS28YPL065W CHL4P38907 458 aa3.68□□□□□ -1.82
VPS28YPL065W INA22P40576 216 aa3.68□□□□□ -1.82
VPS28YPL065W RPL21AQ02753 160 aaKnown RBP3.68□□□□□ -1.82
VPS28YPL065W CAR2P07991 424 aaKnown RBP3.67□□□□□ -1.82
VPS28YPL065W ITR2P30606 609 aa3.67□□□□□ -1.82
VPS28YPL065W MEI5P32489 222 aa3.67□□□□□ -1.82
VPS28YPL065W SMP1P38128 452 aa3.67□□□□□ -1.82
VPS28YPL065W PCL7P40186 285 aa3.67□□□□□ -1.82
VPS28YPL065W VEL1P53058 206 aa3.67□□□□□ -1.82
VPS28YPL065W KTR6P54070 446 aa3.67□□□□□ -1.82
VPS28YPL065W TPS1Q00764 495 aaKnown RBP3.67□□□□□ -1.82
VPS28YPL065W YPR1Q12458 312 aa3.67□□□□□ -1.82
VPS28YPL065W CBP6P07253 162 aaPredicted RBP3.66□□□□□ -1.82
VPS28YPL065W ASP3-2P0CX77 362 aa3.66□□□□□ -1.82
VPS28YPL065W ASP3-3P0CX78 362 aa3.66□□□□□ -1.82
VPS28YPL065W ASP3-4P0CX79 362 aa3.66□□□□□ -1.82
VPS28YPL065W ASP3-1P0CZ17 362 aa3.66□□□□□ -1.82
VPS28YPL065W MSS116P15424 664 aaKnown RBP3.66□□□□□ -1.82
VPS28YPL065W YKL071WP36086 256 aa3.66□□□□□ -1.82
VPS28YPL065W TPC1P53257 314 aa3.66□□□□□ -1.82
VPS28YPL065W VAC14Q06708 880 aa3.66□□□□□ -1.82
VPS28YPL065W MCH1Q07376 486 aa3.66□□□□□ -1.82
VPS28YPL065W SAM4Q08985 325 aaKnown RBP3.66□□□□□ -1.82
VPS28YPL065W BGL2P15703 313 aaKnown RBP3.65□□□□□ -1.83
VPS28YPL065W RAD23P32628 398 aaKnown RBP3.65□□□□□ -1.83
VPS28YPL065W FHL1P39521 936 aa3.65□□□□□ -1.83
VPS28YPL065W SEO1P39709 593 aa3.65□□□□□ -1.83
VPS28YPL065W DSE1P40077 573 aa3.65□□□□□ -1.83
VPS28YPL065W YFL040WP43562 540 aa3.65□□□□□ -1.83
VPS28YPL065W VOA1P53262 265 aa3.65□□□□□ -1.83
VPS28YPL065W NRM1P53718 249 aa3.65□□□□□ -1.83
VPS28YPL065W YPL080CQ02826 108 aa3.65□□□□□ -1.83
VPS28YPL065W FAR10Q06001 478 aa3.65□□□□□ -1.83
VPS28YPL065W RDL2Q08742 149 aaKnown RBP3.65□□□□□ -1.83
VPS28YPL065W MMT2Q08970 484 aa3.65□□□□□ -1.83
VPS28YPL065W SLF1Q12034 447 aaKnown RBP3.65□□□□□ -1.83
VPS28YPL065W LDB17Q12342 491 aa3.65□□□□□ -1.83
VPS28YPL065W PFK27Q12471 397 aaPredicted RBP3.65□□□□□ -1.83
VPS28YPL065W YDL012CQ12489 107 aa3.65□□□□□ -1.83
VPS28YPL065W DCP1Q12517 231 aaPredicted RBP3.65□□□□□ -1.83
VPS28YPL065W MHP1P43638 1398 aa3.64□□□□□ -1.83
VPS28YPL065W DBP3P20447 523 aaKnown RBP3.64□□□□□ -1.83
VPS28YPL065W EPT1P22140 391 aa3.64□□□□□ -1.83
VPS28YPL065W KTI12P34253 313 aaKnown RBP3.64□□□□□ -1.83
VPS28YPL065W MRPL40P36534 297 aa3.64□□□□□ -1.83
VPS28YPL065W SHE3P38272 425 aaKnown RBP3.64□□□□□ -1.83
VPS28YPL065W RRG8Q06109 277 aa3.64□□□□□ -1.83
VPS28YPL065W PBP4Q07362 185 aaKnown RBP3.64□□□□□ -1.83
VPS28YPL065W RAX2Q12465 1220 aa3.64□□□□□ -1.83
VPS28YPL065W CTA1P15202 515 aa3.63□□□□□ -1.83
VPS28YPL065W SAR1P20606 190 aaKnown RBP3.63□□□□□ -1.83
VPS28YPL065W ZRT1P32804 376 aa3.63□□□□□ -1.83
VPS28YPL065W MID2P36027 376 aa3.63□□□□□ -1.83
VPS28YPL065W CDC40P40968 455 aaPredicted RBP3.63□□□□□ -1.83
VPS28YPL065W LOC1P43586 204 aaPredicted RBP3.63□□□□□ -1.83
VPS28YPL065W PNC1P53184 216 aaKnown RBP3.63□□□□□ -1.83
VPS28YPL065W OKP1P53298 406 aa3.63□□□□□ -1.83
VPS28YPL065W IRC4Q03036 179 aa3.63□□□□□ -1.83
VPS28YPL065W ECM18Q04623 453 aa3.63□□□□□ -1.83
VPS28YPL065W YLR012CQ07927 99 aa3.63□□□□□ -1.83
VPS28YPL065W RPN8Q08723 338 aaKnown RBP3.63□□□□□ -1.83
VPS28YPL065W YPQ1Q12010 308 aa3.63□□□□□ -1.83
VPS28YPL065W TIR4Q12218 487 aaPredicted RBP3.63□□□□□ -1.83
VPS28YPL065W CBF5P33322 483 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
VPS28YPL065W TAE1P38340 232 aa3.62□□□□□ -1.83
VPS28YPL065W GGC1P38988 300 aa3.62□□□□□ -1.83
VPS28YPL065W RRT13P40042 185 aa3.62□□□□□ -1.83
VPS28YPL065W PMT4P46971 762 aa3.62□□□□□ -1.83
VPS28YPL065W ARP5P53946 755 aa3.62□□□□□ -1.83
VPS28YPL065W ERV25P54837 211 aaKnown RBP3.62□□□□□ -1.83
VPS28YPL065W VHS1Q03785 461 aa3.62□□□□□ -1.83
VPS28YPL065W API2Q04413 109 aa3.62□□□□□ -1.83
VPS28YPL065W MRX9Q07349 420 aaKnown RBP3.62□□□□□ -1.83
VPS28YPL065W PUT4P15380 627 aa3.61□□□□□ -1.83
VPS28YPL065W DAL80P26343 269 aa3.61□□□□□ -1.83
VPS28YPL065W SPS19P32573 292 aaKnown RBP3.61□□□□□ -1.83
VPS28YPL065W RCK1P38622 512 aa3.61□□□□□ -1.83
VPS28YPL065W PET8P38921 284 aa3.61□□□□□ -1.83
VPS28YPL065W GCD14P46959 383 aaPredicted RBP3.61□□□□□ -1.83
VPS28YPL065W GPI8P49018 411 aa3.61□□□□□ -1.83
VPS28YPL065W UBX2Q04228 584 aa3.61□□□□□ -1.83
VPS28YPL065W MIM1Q08176 113 aa3.61□□□□□ -1.83
VPS28YPL065W YOL029CQ08187 201 aa3.61□□□□□ -1.83
VPS28YPL065W YOL085CQ99345 113 aa3.61□□□□□ -1.83
VPS28YPL065W ERD1P16151 362 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 52.3 ms