RNA–Protein interactions for RNA: YNL245C

CWC25, Transcript of Splicing factor required for the first step of pre-mRNA splicing, yeast

Gene CWC25, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CWC25	YNL245C	STF1	P01098	86 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	LDB16	P25587	256 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	ZUO1	P32527	433 aa	Known RBP	4.66	□□□□□ -1.66
CWC25	YNL245C	YHR182W	P38870	785 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	ALP1	P38971	573 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	CIN2	P46670	268 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	TRF5	P48561	642 aa	Known RBP	4.66	□□□□□ -1.66
CWC25	YNL245C	YET2	Q04210	160 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	CSI1	Q04368	295 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	MHR1	Q06630	226 aa		4.66	□□□□□ -1.66
CWC25	YNL245C	FAR1	P21268	830 aa		4.65	□□□□□ -1.67
CWC25	YNL245C	CHA1	P25379	360 aa	Known RBP	4.65	□□□□□ -1.67
CWC25	YNL245C	RPL16A	P26784	199 aa	Known RBP	4.65	□□□□□ -1.67
CWC25	YNL245C	YHC1	Q05900	231 aa	Known RBP	4.65	□□□□□ -1.67
CWC25	YNL245C	REX3	Q12090	404 aa		4.65	□□□□□ -1.67
CWC25	YNL245C	RPS18A	P0CX55	146 aa	Known RBP	4.64	□□□□□ -1.67
CWC25	YNL245C	RPS18B	P0CX56	146 aa	Predicted RBP	4.64	□□□□□ -1.67
CWC25	YNL245C	MXR2	P25566	168 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	SDS24	P38314	527 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	ATG7	P38862	630 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	YER186C	P40101	306 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	YJR030C	P47101	745 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	LST7	P53237	242 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	YNL146W	P53906	100 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	NAT4	Q04751	285 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	APC5	Q08683	685 aa		4.64	□□□□□ -1.67
CWC25	YNL245C	YLL053C	P0CD98	152 aa		4.63	□□□□□ -1.67
CWC25	YNL245C	MRPS5	P33759	307 aa		4.63	□□□□□ -1.67
CWC25	YNL245C	SRB2	P34162	210 aa		4.63	□□□□□ -1.67
CWC25	YNL245C	PRP39	P39682	629 aa	Known RBP	4.63	□□□□□ -1.67
CWC25	YNL245C	AIP1	P46680	615 aa	Known RBP	4.63	□□□□□ -1.67
CWC25	YNL245C	YGL114W	P53134	725 aa		4.63	□□□□□ -1.67
CWC25	YNL245C	SKI8	Q02793	397 aa	Predicted RBP	4.63	□□□□□ -1.67
CWC25	YNL245C	HMS1	Q12398	434 aa		4.63	□□□□□ -1.67
CWC25	YNL245C	SPO24	Q3E752	67 aa		4.63	□□□□□ -1.67
CWC25	YNL245C	YPT35	P38815	214 aa	Known RBP	4.62	□□□□□ -1.67
CWC25	YNL245C	LIN1	P38852	340 aa	Predicted RBP	4.62	□□□□□ -1.67
CWC25	YNL245C	RBG1	P39729	369 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	DFG10	P40526	253 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	KEG1	P43614	200 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	TIS11	P47977	285 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	YLR152C	P54072	576 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	INM2	Q05533	292 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	YDL109C	Q12103	647 aa		4.62	□□□□□ -1.67
CWC25	YNL245C	HEM4	P06174	275 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	ARF2	P19146	181 aa	Known RBP	4.61	□□□□□ -1.67
CWC25	YNL245C	CDC50	P25656	391 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	SPR1	P32603	445 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	PFS1	P38872	237 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	TIM17	P39515	158 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	HEM14	P40012	539 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	SHE10	P53075	577 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	MSC3	Q05812	728 aa		4.61	□□□□□ -1.67
CWC25	YNL245C	UTR1	P21373	530 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	CIN8	P27895	1000 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	IST2	P38250	946 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	OM14	P38325	134 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	LSM12	P38828	187 aa	Known RBP	4.6	□□□□□ -1.67
CWC25	YNL245C	CWC22	P53333	577 aa	Known RBP	4.6	□□□□□ -1.67
CWC25	YNL245C	PRO2	P54885	456 aa	Known RBP	4.6	□□□□□ -1.67
CWC25	YNL245C	MGR3	Q04472	501 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	TY3A-G	Q12173	290 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	MCT1	Q12283	360 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	TY3A-I	Q99219	290 aa		4.6	□□□□□ -1.67
CWC25	YNL245C	RNR2	P09938	399 aa	Known RBP	4.59	□□□□□ -1.67
CWC25	YNL245C	RPL23A	P0CX41	137 aa	Known RBP	4.59	□□□□□ -1.67
CWC25	YNL245C	RPL23B	P0CX42	137 aa	Known RBP	4.59	□□□□□ -1.67
CWC25	YNL245C	GIT1	P25346	518 aa		4.59	□□□□□ -1.67
CWC25	YNL245C	SUR1	P33300	382 aa		4.59	□□□□□ -1.67
CWC25	YNL245C	YKR015C	P36111	568 aa		4.59	□□□□□ -1.67
CWC25	YNL245C	YMR134W	P40207	237 aa		4.59	□□□□□ -1.67
CWC25	YNL245C	RGS2	Q99188	309 aa		4.59	□□□□□ -1.67
CWC25	YNL245C	UBA3	Q99344	299 aa		4.59	□□□□□ -1.67
CWC25	YNL245C	RAD1	P06777	1100 aa		4.58	□□□□□ -1.68
CWC25	YNL245C	DAL5	P15365	543 aa		4.58	□□□□□ -1.68
CWC25	YNL245C	PCL1	P24867	279 aa		4.58	□□□□□ -1.68
CWC25	YNL245C	VAB2	P40003	282 aa		4.58	□□□□□ -1.68
CWC25	YNL245C	YGL039W	P53183	348 aa	Known RBP	4.58	□□□□□ -1.68
CWC25	YNL245C	CSM3	Q04659	317 aa		4.58	□□□□□ -1.68
CWC25	YNL245C	PRB1	P09232	635 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	GAL3	P13045	520 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	ZRC1	P20107	442 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	MKK1	P32490	508 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	IES6	P32617	166 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	IML3	P38265	245 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	OSW5	P40219	148 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	VAC7	P53950	1165 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	HAL1	Q01766	294 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	FSH2	Q05015	223 aa		4.57	□□□□□ -1.68
CWC25	YNL245C	RTC5	Q12108	567 aa	Known RBP	4.57	□□□□□ -1.68
CWC25	YNL245C	YPR117W	Q06116	2489 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	MYO3	P36006	1272 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	PEX32	P38292	413 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	PRP38	Q00723	242 aa	Predicted RBP	4.56	□□□□□ -1.68
CWC25	YNL245C	ABZ2	Q03266	374 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	ENT5	Q03769	411 aa	Known RBP	4.56	□□□□□ -1.68
CWC25	YNL245C	STE23	Q06010	1027 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	ATP16	Q12165	160 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	SFM1	Q12314	213 aa		4.56	□□□□□ -1.68
CWC25	YNL245C	YDR262W	Q12331	272 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms