RNA–Protein interactions for RNA: YNL232W

CSL4, Transcript of Exosome non-catalytic core component, yeast

Gene CSL4, Length 879 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSL4	YNL232W	DIF1	O13577	133 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	CAR1	P00812	333 aa	Known RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	STF1	P01098	86 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	CBP2	P03874	630 aa	Predicted RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	HNM1	P19807	563 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	UTR1	P21373	530 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	SSE1	P32589	693 aa	Known RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	CAT2	P32796	670 aa	Known RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	YPT7	P32939	208 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	YBR220C	P38318	560 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	LYS12	P40495	371 aa	Known RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	BIT61	P47041	543 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	UBC9	P50623	157 aa	Predicted RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	IST1	P53843	298 aa	Predicted RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	ACS1	Q01574	713 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	IRC15	Q02733	499 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	VPS74	Q06385	345 aa		5.07	□□□□□ -1.6
CSL4	YNL232W	FMP40	Q08968	688 aa	Predicted RBP	5.07	□□□□□ -1.6
CSL4	YNL232W	RPC40	P07703	335 aa	Known RBP	5.06	□□□□□ -1.6
CSL4	YNL232W	MER1	P16523	270 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	MRPL25	P23369	157 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	BUB2	P26448	306 aa	Predicted RBP	5.06	□□□□□ -1.6
CSL4	YNL232W	ITR1	P30605	584 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	ITR2	P30606	609 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	SPC29	P33419	253 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	YKL102C	P34249	101 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	ECM1	P39715	212 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	PTR3	P43606	678 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	RET2	P43621	546 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	PRP31	P49704	494 aa	Predicted RBP	5.06	□□□□□ -1.6
CSL4	YNL232W	LSG1	P53145	640 aa	Known RBP	5.06	□□□□□ -1.6
CSL4	YNL232W	PCP1	P53259	346 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	LSC1	P53598	329 aa	Known RBP	5.06	□□□□□ -1.6
CSL4	YNL232W	SLM2	P53955	656 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	SHR3	Q02774	210 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	YPL039W	Q03080	316 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	ECM11	Q04110	302 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	HFD1	Q04458	532 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	YDR124W	Q04608	324 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	HNT3	Q08702	217 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	BSC1	Q12140	328 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	RPN5	Q12250	445 aa	Known RBP	5.06	□□□□□ -1.6
CSL4	YNL232W	YDL180W	Q12301	547 aa		5.06	□□□□□ -1.6
CSL4	YNL232W	KSS1	P14681	368 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	EHD3	P28817	500 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	YOR062C	P36025	268 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	SCO2	P38072	301 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	STP2	P38704	541 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	YHL044W	P38727	235 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	YER188W	P40103	239 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	AIM20	P40451	204 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	AAD10	P47182	288 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	GOR1	P53839	350 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	IDP3	P53982	420 aa	Known RBP	5.05	□□□□□ -1.6
CSL4	YNL232W	RIM13	Q03792	727 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	ATG38	Q05789	226 aa	Known RBP	5.05	□□□□□ -1.6
CSL4	YNL232W	RGC1	Q06108	1083 aa	Known RBP	5.05	□□□□□ -1.6
CSL4	YNL232W	ARV1	Q06541	321 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	SET6	Q12529	373 aa		5.05	□□□□□ -1.6
CSL4	YNL232W	RHO2	P06781	192 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	RER1	P25560	188 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	NPL6	P32832	435 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	RIB7	P33312	244 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	FAA2	P39518	744 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	GPP2	P40106	250 aa	Known RBP	5.04	□□□□□ -1.6
CSL4	YNL232W	PCL7	P40186	285 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	AYR1	P40471	297 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	YIL029C	P40538	142 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	YIR020C	P40575	100 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	MEP3	P53390	489 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	RSM28	Q03430	361 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	STE23	Q06010	1027 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	RDL2	Q08742	149 aa	Known RBP	5.04	□□□□□ -1.6
CSL4	YNL232W	GRE1	Q08969	168 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	NUR1	Q12066	484 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	RMP1	Q12530	201 aa		5.04	□□□□□ -1.6
CSL4	YNL232W	RPN13	O13563	156 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	RHO1	P06780	209 aa	Known RBP	5.03	□□□□□ -1.6
CSL4	YNL232W	PHO81	P17442	1178 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	SCO1	P23833	295 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	RPN2	P32565	945 aa	Known RBP	5.03	□□□□□ -1.6
CSL4	YNL232W	RIM2	P38127	377 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	OLA1	P38219	394 aa	Known RBP	5.03	□□□□□ -1.6
CSL4	YNL232W	SMK1	P41808	388 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	NCA3	P46955	337 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	NIT2	P47016	307 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	NAS6	P50086	228 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	SBH2	P52871	88 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	GTR1	Q00582	310 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	EKI1	Q03764	534 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	COX20	Q04935	205 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	YTH1	Q06102	208 aa	Predicted RBP	5.03	□□□□□ -1.6
CSL4	YNL232W	ARR1	Q06596	294 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	YLR053C	Q12026	108 aa		5.03	□□□□□ -1.6
CSL4	YNL232W	REP1	P03871	373 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	ILV2	P07342	687 aa	Known RBP	5.02	□□□□□ -1.61
CSL4	YNL232W	ADH4	P10127	382 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	CTR86	P25355	563 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	SEC17	P32602	292 aa		5.02	□□□□□ -1.61
CSL4	YNL232W	ECM14	P38836	430 aa		5.02	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms