RNA–Protein interactions for RNA: YMR287C

DSS1, Transcript of 3'-5' exoribonuclease, yeast

Gene DSS1, Length 2,910 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSS1	YMR287C	REX2	P54964	269 aa	Known RBP	3.18	□□□□□ -1.9
DSS1	YMR287C	YET2	Q04210	160 aa		3.18	□□□□□ -1.9
DSS1	YMR287C	POL30	P15873	258 aa	Known RBP	3.17	□□□□□ -1.9
DSS1	YMR287C	RPC25	P35718	212 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	CTM1	P38818	585 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	RMI1	Q02685	241 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	GLE1	Q12315	538 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	PUT4	P15380	627 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	SAR1	P20606	190 aa	Known RBP	3.17	□□□□□ -1.9
DSS1	YMR287C	NUP2	P32499	720 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	PDC2	P32896	925 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
DSS1	YMR287C	DSE1	P40077	573 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	YPL080C	Q02826	108 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	RDL2	Q08742	149 aa	Known RBP	3.17	□□□□□ -1.9
DSS1	YMR287C	RSA1	Q08932	381 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	APC9	Q12107	265 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	RGS2	Q99188	309 aa		3.17	□□□□□ -1.9
DSS1	YMR287C	GAL7	P08431	366 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	RPL31A	P0C2H8	113 aa	Known RBP	3.16	□□□□□ -1.9
DSS1	YMR287C	GIT1	P25346	518 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	AIM23	P47015	356 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	YGR015C	P53208	328 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	YGR266W	P53326	701 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	IRC25	Q07951	179 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	PRP46	Q12417	451 aa	Predicted RBP	3.16	□□□□□ -1.9
DSS1	YMR287C	RPP0	P05317	312 aa	Known RBP	3.16	□□□□□ -1.9
DSS1	YMR287C	COS9	P36034	407 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	SOP4	P39543	234 aa	Predicted RBP	3.16	□□□□□ -1.9
DSS1	YMR287C	YGL242C	P53066	181 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	MHR1	Q06630	226 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	DDC1	Q08949	612 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	YGR018C	P53211	109 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	CLD1	P53264	445 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	YDR018C	Q12185	396 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	NAG1	Q8TGN9	163 aa		3.16	□□□□□ -1.9
DSS1	YMR287C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.9	not detected
DSS1	YMR287C	OM14	P38325	134 aa		3.15	□□□□□ -1.9
DSS1	YMR287C	YHR182W	P38870	785 aa		3.15	□□□□□ -1.9
DSS1	YMR287C	NPT1	P39683	429 aa	Known RBP	3.15	□□□□□ -1.9
DSS1	YMR287C	VHT1	P53241	593 aa		3.15	□□□□□ -1.9
DSS1	YMR287C	YNL260C	P53846	198 aa		3.15	□□□□□ -1.9
DSS1	YMR287C	YLR152C	P54072	576 aa		3.15	□□□□□ -1.9
DSS1	YMR287C	TPS1	Q00764	495 aa	Known RBP	3.15	□□□□□ -1.9
DSS1	YMR287C	RLP24	Q07915	199 aa	Known RBP	3.15	□□□□□ -1.9
DSS1	YMR287C	UBC13	P52490	153 aa		3.15	□□□□□ -1.91
DSS1	YMR287C	SIA1	Q12212	622 aa		3.15	□□□□□ -1.91
DSS1	YMR287C	YBR062C	P38239	180 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	YPC1	P38298	316 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	HAC1	P41546	238 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	KTR6	P54070	446 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	IRC4	Q03036	179 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	PAL1	Q05518	499 aa	Known RBP	3.14	□□□□□ -1.91
DSS1	YMR287C	YBL111C	Q3E7Y5	667 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	MRPL27	P36526	146 aa	Predicted RBP	3.14	□□□□□ -1.91
DSS1	YMR287C	HIS2	P38635	335 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	YHR035W	P38769	630 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	PEX18	P38855	283 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	RRG9	P40156	214 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	BIR1	P47134	954 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	CDH1	P53197	566 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	VBA1	Q04301	562 aa		3.14	□□□□□ -1.91
DSS1	YMR287C	RPN8	Q08723	338 aa	Known RBP	3.14	□□□□□ -1.91
DSS1	YMR287C	PRM9	P39551	298 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	OXA1	P39952	402 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	PRE5	P40302	234 aa	Known RBP	3.13	□□□□□ -1.91
DSS1	YMR287C	MAM33	P40513	266 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	YLR177W	Q06251	628 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	BCP1	Q06338	283 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	PIN3	Q06449	215 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
DSS1	YMR287C	YOX1	P34161	385 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	GPX1	P36014	167 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	TIM17	P39515	158 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	AGP3	P43548	558 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	ARV1	Q06541	321 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	EHD3	P28817	500 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	IMP3	P32899	183 aa	Predicted RBP	3.13	□□□□□ -1.91
DSS1	YMR287C	SHE3	P38272	425 aa	Known RBP	3.13	□□□□□ -1.91
DSS1	YMR287C	RNY1	Q02933	434 aa	Known RBP	3.13	□□□□□ -1.91
DSS1	YMR287C	TAZ1	Q06510	381 aa		3.13	□□□□□ -1.91
DSS1	YMR287C	MRX9	Q07349	420 aa	Known RBP	3.13	□□□□□ -1.91
DSS1	YMR287C	VAB2	P40003	282 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	MOB2	P43563	287 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	ACT1	P60010	375 aa	Known RBP	3.12	□□□□□ -1.91
DSS1	YMR287C	PBP4	Q07362	185 aa	Known RBP	3.12	□□□□□ -1.91
DSS1	YMR287C	YIL002W-A	Q3E7Z5	69 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	AAT2	P23542	418 aa	Known RBP	3.12	□□□□□ -1.91
DSS1	YMR287C	YKL187C	P34231	750 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	ECM8	P38246	354 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	TPN1	P53099	579 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	SNX41	Q04053	625 aa		3.12	□□□□□ -1.91
DSS1	YMR287C	WTM1	Q12363	437 aa	Known RBP	3.12	□□□□□ -1.91
DSS1	YMR287C	NAM2	P11325	894 aa		3.11	□□□□□ -1.91
DSS1	YMR287C	CYM1	P32898	989 aa		3.11	□□□□□ -1.91
DSS1	YMR287C	YFR057W	P43625	151 aa		3.11	□□□□□ -1.91
DSS1	YMR287C	COX16	P47081	118 aa		3.11	□□□□□ -1.91
DSS1	YMR287C	TIM21	P53220	239 aa		3.11	□□□□□ -1.91
DSS1	YMR287C	TMC1	Q08422	150 aa	Predicted RBP	3.11	□□□□□ -1.91
DSS1	YMR287C	TIP20	P33891	701 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms