RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C YPS7Q06325 596 aa8.37□□□□□ -1.07
SEC61YLR378C IPK1Q06667 281 aa8.37□□□□□ -1.07
SEC61YLR378C NGL1Q08213 363 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C THP3Q12049 470 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C YDL109CQ12103 647 aa8.37□□□□□ -1.07
SEC61YLR378C PRP46Q12417 451 aaPredicted RBP8.37□□□□□ -1.07
SEC61YLR378C CYR1P08678 2026 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C ADE5,7P07244 802 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C ARF1P11076 181 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C DAT1P13483 248 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C NCP1P16603 691 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C DAL82P21705 255 aa8.37□□□□□ -1.07
SEC61YLR378C FPS1P23900 669 aa8.37□□□□□ -1.07
SEC61YLR378C YEF1P32622 495 aa8.37□□□□□ -1.07
SEC61YLR378C MTC2P34246 357 aa8.37□□□□□ -1.07
SEC61YLR378C RRP4P38792 359 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C PFS2P42841 465 aaKnown RBP8.37□□□□□ -1.07
SEC61YLR378C YJL055WP47044 245 aa8.37□□□□□ -1.07
SEC61YLR378C SCW11P53189 542 aa8.37□□□□□ -1.07
SEC61YLR378C MPA43P53583 542 aaPredicted RBP8.37□□□□□ -1.07
SEC61YLR378C HDA2Q06629 674 aa8.37□□□□□ -1.07
SEC61YLR378C AVO1Q08236 1176 aa8.37□□□□□ -1.07
SEC61YLR378C MCP1Q12106 302 aa8.37□□□□□ -1.07
SEC61YLR378C YGR161W-CQ3E744 92 aa8.37□□□□□ -1.07
SEC61YLR378C RPP2BP02400 110 aaKnown RBP8.36□□□□□ -1.07
SEC61YLR378C NFT1P0CE68 1218 aa8.36□□□□□ -1.07
SEC61YLR378C YPK2P18961 677 aa8.36□□□□□ -1.07
SEC61YLR378C NUP1P20676 1076 aa8.36□□□□□ -1.07
SEC61YLR378C PRE2P30656 287 aaKnown RBP8.36□□□□□ -1.07
SEC61YLR378C NIC96P34077 839 aa8.36□□□□□ -1.07
SEC61YLR378C RSM22P36056 628 aa8.36□□□□□ -1.07
SEC61YLR378C FCY21P40039 528 aa8.36□□□□□ -1.07
SEC61YLR378C RTT105P40063 208 aa8.36□□□□□ -1.07
SEC61YLR378C HXT9P40885 567 aa8.36□□□□□ -1.07
SEC61YLR378C CIN1P40987 1014 aa8.36□□□□□ -1.07
SEC61YLR378C RPA14P50106 137 aa8.36□□□□□ -1.07
SEC61YLR378C RAI1P53063 387 aaKnown RBP8.36□□□□□ -1.07
SEC61YLR378C OGG1P53397 376 aaPredicted RBP8.36□□□□□ -1.07
SEC61YLR378C RRN9P53437 365 aa8.36□□□□□ -1.07
SEC61YLR378C HXT11P54862 567 aa8.36□□□□□ -1.07
SEC61YLR378C YKR005CQ02203 525 aa8.36□□□□□ -1.07
SEC61YLR378C GPN3Q06543 272 aa8.36□□□□□ -1.07
SEC61YLR378C FRE5Q08908 694 aa8.36□□□□□ -1.07
SEC61YLR378C YOL114CQ12322 202 aa8.36□□□□□ -1.07
SEC61YLR378C YEL009C-AA0A023PZF2 135 aa8.35□□□□□ -1.07
SEC61YLR378C TEC1P18412 486 aa8.35□□□□□ -1.07
SEC61YLR378C AHC2P25649 128 aa8.35□□□□□ -1.07
SEC61YLR378C ECT1P33412 323 aa8.35□□□□□ -1.07
SEC61YLR378C SEC66P33754 206 aa8.35□□□□□ -1.07
SEC61YLR378C YKL071WP36086 256 aa8.35□□□□□ -1.07
SEC61YLR378C FET3P38993 636 aa8.35□□□□□ -1.07
SEC61YLR378C YIL165CP40446 119 aa8.35□□□□□ -1.07
SEC61YLR378C AIM20P40451 204 aa8.35□□□□□ -1.07
SEC61YLR378C SDP1P40479 209 aa8.35□□□□□ -1.07
SEC61YLR378C HIS6P40545 261 aa8.35□□□□□ -1.07
SEC61YLR378C GDS1P41913 522 aa8.35□□□□□ -1.07
SEC61YLR378C SNO3P43544 222 aa8.35□□□□□ -1.07
SEC61YLR378C SFH5P47008 294 aa8.35□□□□□ -1.07
SEC61YLR378C CWC23P52868 283 aaPredicted RBP8.35□□□□□ -1.07
SEC61YLR378C PAL1Q05518 499 aaKnown RBP8.35□□□□□ -1.07
SEC61YLR378C ENB1Q08299 606 aa8.35□□□□□ -1.07
SEC61YLR378C YDL176WQ12027 708 aa8.35□□□□□ -1.07
SEC61YLR378C YBL113CQ7M4S9 792 aa8.35□□□□□ -1.07
SEC61YLR378C FAS1P07149 2051 aaKnown RBP8.34□□□□□ -1.07
SEC61YLR378C PUB1P32588 453 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07 RIP-Chip
SEC61YLR378C TRS65P32893 560 aa8.34□□□□□ -1.07
SEC61YLR378C SDS22P36047 338 aa8.34□□□□□ -1.07
SEC61YLR378C DTR1P38125 572 aa8.34□□□□□ -1.07
SEC61YLR378C MTC4P38335 694 aaKnown RBP8.34□□□□□ -1.07
SEC61YLR378C VBA2P38358 474 aaKnown RBP8.34□□□□□ -1.07
SEC61YLR378C STS1P38637 319 aa8.34□□□□□ -1.07
SEC61YLR378C PHO90P39535 881 aa8.34□□□□□ -1.07
SEC61YLR378C YJL218WP40892 196 aaKnown RBP8.34□□□□□ -1.07
SEC61YLR378C SER2P42941 309 aa8.34□□□□□ -1.07
SEC61YLR378C IRC6P43615 237 aa8.34□□□□□ -1.07
SEC61YLR378C BUD9P53226 547 aa8.34□□□□□ -1.07
SEC61YLR378C MKC7P53379 596 aa8.34□□□□□ -1.07
SEC61YLR378C RHO5P53879 331 aaKnown RBP8.34□□□□□ -1.07
SEC61YLR378C TDA1Q03533 586 aa8.34□□□□□ -1.07
SEC61YLR378C EKI1Q03764 534 aa8.34□□□□□ -1.07
SEC61YLR378C UTP21Q06078 939 aaPredicted RBP8.34□□□□□ -1.07
SEC61YLR378C COQ10Q08058 207 aa8.34□□□□□ -1.07
SEC61YLR378C YOL073CQ08232 322 aa8.34□□□□□ -1.07
SEC61YLR378C TAD3Q9URQ3 322 aa8.34□□□□□ -1.07
SEC61YLR378C COX1P00401 534 aa8.33□□□□□ -1.08
SEC61YLR378C YCL002CP25565 263 aa8.33□□□□□ -1.08
SEC61YLR378C FUN26P31381 517 aa8.33□□□□□ -1.08
SEC61YLR378C RIB7P33312 244 aa8.33□□□□□ -1.08
SEC61YLR378C OCA5P38738 679 aa8.33□□□□□ -1.08
SEC61YLR378C YHR180WP38868 163 aa8.33□□□□□ -1.08
SEC61YLR378C UME6P39001 836 aa8.33□□□□□ -1.08
SEC61YLR378C CUP9P41817 306 aa8.33□□□□□ -1.08
SEC61YLR378C ECL1P48235 211 aa8.33□□□□□ -1.08
SEC61YLR378C LCL3P53153 274 aa8.33□□□□□ -1.08
SEC61YLR378C VOA1P53262 265 aa8.33□□□□□ -1.08
SEC61YLR378C DCR2Q05924 578 aa8.33□□□□□ -1.08
SEC61YLR378C HNT3Q08702 217 aa8.33□□□□□ -1.08
SEC61YLR378C RCN2Q12044 265 aa8.33□□□□□ -1.08
SEC61YLR378C YPR1Q12458 312 aa8.33□□□□□ -1.08
SEC61YLR378C SFG1Q12507 346 aa8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.3 ms