RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W RPN8Q08723 338 aaKnown RBP2.52□□□□□ -2.01
SMD2YLR275W MAS1P10507 462 aa2.51□□□□□ -2.01
SMD2YLR275W THR4P16120 514 aaKnown RBP2.51□□□□□ -2.01
SMD2YLR275W MKK1P32490 508 aa2.51□□□□□ -2.01
SMD2YLR275W CAJ1P39101 391 aa2.51□□□□□ -2.01
SMD2YLR275W CUE3P53137 624 aaKnown RBP2.51□□□□□ -2.01
SMD2YLR275W YGR016WP53209 190 aa2.51□□□□□ -2.01
SMD2YLR275W YNL143CP53908 130 aa2.51□□□□□ -2.01
SMD2YLR275W NAT4Q04751 285 aa2.51□□□□□ -2.01
SMD2YLR275W APC5Q08683 685 aa2.51□□□□□ -2.01
SMD2YLR275W GLE1Q12315 538 aa2.51□□□□□ -2.01
SMD2YLR275W SFG1Q12507 346 aa2.51□□□□□ -2.01
SMD2YLR275W NBL1Q3E7Y6 73 aa2.51□□□□□ -2.01
SMD2YLR275W STE3P06783 470 aa2.5□□□□□ -2.01
SMD2YLR275W SMI1P32566 505 aa2.5□□□□□ -2.01
SMD2YLR275W CBF5P33322 483 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
SMD2YLR275W RRB1Q04225 511 aaKnown RBP2.5□□□□□ -2.01
SMD2YLR275W GMC1Q04399 608 aa2.5□□□□□ -2.01
SMD2YLR275W YMR310CQ04867 317 aaPredicted RBP2.5□□□□□ -2.01
SMD2YLR275W YDR286CQ05530 114 aa2.5□□□□□ -2.01
SMD2YLR275W TAF10Q12030 206 aa2.5□□□□□ -2.01
SMD2YLR275W YOR012WQ12351 137 aa2.5□□□□□ -2.01
SMD2YLR275W VPS63O13549 108 aa2.49□□□□□ -2.01
SMD2YLR275W MXR2P25566 168 aa2.49□□□□□ -2.01
SMD2YLR275W HMX1P32339 317 aa2.49□□□□□ -2.01
SMD2YLR275W YMR262WP38430 313 aa2.49□□□□□ -2.01
SMD2YLR275W YIL089WP40500 205 aa2.49□□□□□ -2.01
SMD2YLR275W HIT1P46973 164 aa2.49□□□□□ -2.01
SMD2YLR275W SMD1Q02260 146 aaPredicted RBP2.49□□□□□ -2.01
SMD2YLR275W PML1Q07930 204 aaPredicted RBP2.49□□□□□ -2.01
SMD2YLR275W RPN6Q12377 434 aa2.49□□□□□ -2.01
SMD2YLR275W TAL1P15019 335 aaKnown RBP2.48□□□□□ -2.01
SMD2YLR275W CUP2P15315 225 aa2.48□□□□□ -2.01
SMD2YLR275W CPT1P17898 393 aa2.48□□□□□ -2.01
SMD2YLR275W SAG1P20840 650 aa2.48□□□□□ -2.01
SMD2YLR275W UTR1P21373 530 aa2.48□□□□□ -2.01
SMD2YLR275W YEL043WP32618 956 aa2.48□□□□□ -2.01
SMD2YLR275W UIP5P36137 443 aa2.48□□□□□ -2.01
SMD2YLR275W YCH1P42937 148 aa2.48□□□□□ -2.01
SMD2YLR275W YHC3P47040 408 aa2.48□□□□□ -2.01
SMD2YLR275W HRT1Q08273 121 aa2.48□□□□□ -2.01
SMD2YLR275W PGC1Q08959 321 aa2.48□□□□□ -2.01
SMD2YLR275W PSY3Q12318 242 aa2.48□□□□□ -2.01
SMD2YLR275W YPR096CO13587 100 aa2.47□□□□□ -2.01
SMD2YLR275W ERG9P29704 444 aa2.47□□□□□ -2.01
SMD2YLR275W RRG9P40156 214 aa2.47□□□□□ -2.01
SMD2YLR275W YJL144WP47009 104 aa2.47□□□□□ -2.01
SMD2YLR275W PDR16P53860 351 aaKnown RBP2.47□□□□□ -2.01
SMD2YLR275W INP1Q03694 420 aa2.47□□□□□ -2.01
SMD2YLR275W YMR244WQ04018 355 aa2.47□□□□□ -2.01
SMD2YLR275W RAD1P06777 1100 aa2.46□□□□□ -2.02
SMD2YLR275W TPM1P17536 199 aaKnown RBP2.46□□□□□ -2.02
SMD2YLR275W YHR122WP38829 231 aa2.46□□□□□ -2.02
SMD2YLR275W FYV8P46949 817 aaKnown RBP2.46□□□□□ -2.02
SMD2YLR275W ECM19Q06011 112 aa2.46□□□□□ -2.02
SMD2YLR275W ARR1Q06596 294 aa2.46□□□□□ -2.02
SMD2YLR275W DFM1Q12743 341 aaKnown RBP2.46□□□□□ -2.02
SMD2YLR275W RPS23AP0CX29 145 aaKnown RBP2.45□□□□□ -2.02
SMD2YLR275W RPS23BP0CX30 145 aa2.45□□□□□ -2.02
SMD2YLR275W TRX1P22217 103 aaKnown RBP2.45□□□□□ -2.02
SMD2YLR275W HXT2P23585 541 aa2.45□□□□□ -2.02
SMD2YLR275W ZRT3P34240 503 aa2.45□□□□□ -2.02
SMD2YLR275W SPH1Q06160 661 aa2.45□□□□□ -2.02
SMD2YLR275W DIB1Q06819 143 aaPredicted RBP2.45□□□□□ -2.02
SMD2YLR275W MHP1P43638 1398 aa2.45□□□□□ -2.02
SMD2YLR275W YLL053CP0CD98 152 aa2.44□□□□□ -2.02
SMD2YLR275W CTA1P15202 515 aa2.44□□□□□ -2.02
SMD2YLR275W VMA2P16140 517 aaKnown RBP2.44□□□□□ -2.02
SMD2YLR275W RPB9P27999 122 aa2.44□□□□□ -2.02
SMD2YLR275W RFT1P38206 574 aaPredicted RBP2.44□□□□□ -2.02
SMD2YLR275W IML3P38265 245 aa2.44□□□□□ -2.02
SMD2YLR275W PEX32P38292 413 aa2.44□□□□□ -2.02
SMD2YLR275W ALP1P38971 573 aa2.44□□□□□ -2.02
SMD2YLR275W YMR134WP40207 237 aa2.44□□□□□ -2.02
SMD2YLR275W NAS2P40555 220 aa2.44□□□□□ -2.02
SMD2YLR275W MIC19P43594 170 aa2.44□□□□□ -2.02
SMD2YLR275W ASG7P46993 209 aa2.44□□□□□ -2.02
SMD2YLR275W TPC1P53257 314 aa2.44□□□□□ -2.02
SMD2YLR275W YNL146WP53906 100 aa2.44□□□□□ -2.02
SMD2YLR275W DAL5P15365 543 aa2.43□□□□□ -2.02
SMD2YLR275W MMS21P38632 267 aa2.43□□□□□ -2.02
SMD2YLR275W PRP39P39682 629 aaKnown RBP2.43□□□□□ -2.02
SMD2YLR275W YIL054WP40524 105 aa2.43□□□□□ -2.02
SMD2YLR275W YGL114WP53134 725 aa2.43□□□□□ -2.02
SMD2YLR275W FMP48P53233 369 aa2.43□□□□□ -2.02
SMD2YLR275W PRP46Q12417 451 aaPredicted RBP2.43□□□□□ -2.02
SMD2YLR275W KRR1P25586 316 aaPredicted RBP2.42□□□□□ -2.02
SMD2YLR275W CIN8P27895 1000 aa2.42□□□□□ -2.02
SMD2YLR275W ITR2P30606 609 aa2.42□□□□□ -2.02
SMD2YLR275W SHE4P51534 789 aa2.42□□□□□ -2.02
SMD2YLR275W HCH1P53834 153 aa2.42□□□□□ -2.02
SMD2YLR275W SPO24Q3E752 67 aa2.42□□□□□ -2.02
SMD2YLR275W RGS2Q99188 309 aa2.42□□□□□ -2.02
SMD2YLR275W SAL1D6W196 494 aa2.41□□□□□ -2.02
SMD2YLR275W HPR1P17629 752 aaKnown RBP2.41□□□□□ -2.02
SMD2YLR275W DCC1P25559 380 aa2.41□□□□□ -2.02
SMD2YLR275W YKL187CP34231 750 aa2.41□□□□□ -2.02
SMD2YLR275W KTI12P34253 313 aaKnown RBP2.41□□□□□ -2.02
SMD2YLR275W MYO3P36006 1272 aa2.41□□□□□ -2.02
SMD2YLR275W RCK1P38622 512 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms