RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C DPH5P32469 300 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C SPS19P32573 292 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C MTH1P35198 433 aa1.71□□□□□ -2.14
IRC20YLR247C BNA4P38169 460 aa1.71□□□□□ -2.14
IRC20YLR247C POP8P38208 133 aa1.71□□□□□ -2.14
IRC20YLR247C NTC20P38302 140 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C PIH1P38768 344 aa1.71□□□□□ -2.14
IRC20YLR247C YHR218WP38899 603 aa1.71□□□□□ -2.14
IRC20YLR247C SIT1P39980 628 aa1.71□□□□□ -2.14
IRC20YLR247C AVT2P39981 480 aa1.71□□□□□ -2.14
IRC20YLR247C MIT1P40002 666 aa1.71□□□□□ -2.14
IRC20YLR247C SDP1P40479 209 aa1.71□□□□□ -2.14
IRC20YLR247C LYS12P40495 371 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C HXT14P42833 540 aa1.71□□□□□ -2.14
IRC20YLR247C SNG1P46950 547 aa1.71□□□□□ -2.14
IRC20YLR247C NAS6P50086 228 aa1.71□□□□□ -2.14
IRC20YLR247C TAD1P53065 400 aa1.71□□□□□ -2.14
IRC20YLR247C SDT1P53078 280 aa1.71□□□□□ -2.14
IRC20YLR247C GEP7P53171 287 aa1.71□□□□□ -2.14
IRC20YLR247C COG7P53195 279 aa1.71□□□□□ -2.14
IRC20YLR247C SSU72P53538 206 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C YNL144CP53907 740 aa1.71□□□□□ -2.14
IRC20YLR247C YNL140CP53910 189 aa1.71□□□□□ -2.14
IRC20YLR247C DMA2P53924 522 aa1.71□□□□□ -2.14
IRC20YLR247C RHO3Q00245 231 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C SED5Q01590 340 aa1.71□□□□□ -2.14
IRC20YLR247C ECM9Q02202 377 aa1.71□□□□□ -2.14
IRC20YLR247C YKR011CQ02209 353 aa1.71□□□□□ -2.14
IRC20YLR247C PEX25Q02969 394 aa1.71□□□□□ -2.14
IRC20YLR247C NEJ1Q06148 342 aa1.71□□□□□ -2.14
IRC20YLR247C YPQ2Q06328 317 aa1.71□□□□□ -2.14
IRC20YLR247C PHO92Q06390 306 aa1.71□□□□□ -2.14
IRC20YLR247C MHR1Q06630 226 aa1.71□□□□□ -2.14
IRC20YLR247C MRPL35Q06678 367 aa1.71□□□□□ -2.14
IRC20YLR247C REH1Q06709 432 aa1.71□□□□□ -2.14
IRC20YLR247C YDL114WQ07530 308 aa1.71□□□□□ -2.14
IRC20YLR247C RCL1Q08096 367 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C YPL272CQ08984 517 aa1.71□□□□□ -2.14
IRC20YLR247C YPL150WQ12152 901 aa1.71□□□□□ -2.14
IRC20YLR247C YPR1Q12458 312 aa1.71□□□□□ -2.14
IRC20YLR247C SPO24Q3E752 67 aa1.71□□□□□ -2.14
IRC20YLR247C YOR338WQ99326 363 aa1.71□□□□□ -2.14
IRC20YLR247C SUC2P00724 532 aa1.71□□□□□ -2.14
IRC20YLR247C COX9P07255 59 aa1.71□□□□□ -2.14
IRC20YLR247C CIT2P08679 460 aa1.71□□□□□ -2.14
IRC20YLR247C RPS8AP0CX39 200 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C RPS8BP0CX40 200 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C NPR1P22211 790 aa1.71□□□□□ -2.14
IRC20YLR247C PUT3P25502 979 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C YCR090CP25654 182 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C MLF3P32047 452 aa1.71□□□□□ -2.14
IRC20YLR247C GSH1P32477 678 aa1.71□□□□□ -2.14
IRC20YLR247C SGE1P33335 543 aa1.71□□□□□ -2.14
IRC20YLR247C NNK1P36003 928 aa1.71□□□□□ -2.14
IRC20YLR247C GMH1P36125 273 aa1.71□□□□□ -2.14
IRC20YLR247C RCK1P38622 512 aa1.71□□□□□ -2.14
IRC20YLR247C PRS3P38689 320 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C GRE3P38715 327 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
IRC20YLR247C END3P39013 349 aa1.71□□□□□ -2.14
IRC20YLR247C VMA7P39111 118 aa1.71□□□□□ -2.14
IRC20YLR247C CIN5P40917 295 aa1.71□□□□□ -2.14
IRC20YLR247C YFR020WP43600 232 aa1.71□□□□□ -2.14
IRC20YLR247C YJL016WP47072 561 aa1.71□□□□□ -2.14
IRC20YLR247C SEH1P53011 349 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C ATG4P53867 494 aa1.71□□□□□ -2.14
IRC20YLR247C MRPL22P53881 309 aa1.71□□□□□ -2.14
IRC20YLR247C MUS81Q04149 632 aaPredicted RBP1.71□□□□□ -2.14
IRC20YLR247C YPS7Q06325 596 aa1.71□□□□□ -2.14
IRC20YLR247C PUN1Q06991 263 aa1.71□□□□□ -2.14
IRC20YLR247C DIS3Q08162 1001 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C NBA1Q08229 501 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C IMA2Q08295 589 aa1.71□□□□□ -2.14
IRC20YLR247C FYV7Q12247 151 aa1.71□□□□□ -2.14
IRC20YLR247C PCL9Q12477 304 aa1.71□□□□□ -2.14
IRC20YLR247C SEC16P48415 2195 aaKnown RBP1.71□□□□□ -2.14
IRC20YLR247C AI3P03877 415 aa1.7□□□□□ -2.14
IRC20YLR247C RPS3P05750 240 aaKnown RBP1.7□□□□□ -2.14
IRC20YLR247C CDC6P09119 513 aa1.7□□□□□ -2.14
IRC20YLR247C UNG1P12887 359 aa1.7□□□□□ -2.14
IRC20YLR247C DPM1P14020 267 aaKnown RBP1.7□□□□□ -2.14
IRC20YLR247C SAM35P14693 329 aa1.7□□□□□ -2.14
IRC20YLR247C VMA3P25515 160 aa1.7□□□□□ -2.14
IRC20YLR247C SFA1P32771 386 aa1.7□□□□□ -2.14
IRC20YLR247C FAA2P39518 744 aa1.7□□□□□ -2.14
IRC20YLR247C SEC72P39742 193 aaKnown RBP1.7□□□□□ -2.14
IRC20YLR247C SPC25P40014 221 aa1.7□□□□□ -2.14
IRC20YLR247C PIC2P40035 300 aa1.7□□□□□ -2.14
IRC20YLR247C QRI7P43122 407 aa1.7□□□□□ -2.14
IRC20YLR247C COS4P43542 379 aa1.7□□□□□ -2.14
IRC20YLR247C BNA2P47125 453 aa1.7□□□□□ -2.14
IRC20YLR247C UFD1P53044 361 aa1.7□□□□□ -2.14
IRC20YLR247C OCA2P53949 197 aa1.7□□□□□ -2.14
IRC20YLR247C TGL2P54857 326 aa1.7□□□□□ -2.14
IRC20YLR247C TPS1Q00764 495 aaKnown RBP1.7□□□□□ -2.14
IRC20YLR247C WAR1Q03631 944 aa1.7□□□□□ -2.14
IRC20YLR247C COX20Q04935 205 aa1.7□□□□□ -2.14
IRC20YLR247C TAZ1Q06510 381 aa1.7□□□□□ -2.14
IRC20YLR247C GRS2Q06817 618 aa1.7□□□□□ -2.14
IRC20YLR247C LUC7Q07508 261 aaPredicted RBP1.7□□□□□ -2.14
IRC20YLR247C YFH1Q07540 174 aa1.7□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms