RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C EOS1P53938 366 aa1.89□□□□□ -2.11
AFB1YLR040C FAR10Q06001 478 aa1.89□□□□□ -2.11
AFB1YLR040C ECM19Q06011 112 aa1.89□□□□□ -2.11
AFB1YLR040C APC2Q12440 853 aa1.89□□□□□ -2.11
AFB1YLR040C HMX1P32339 317 aa1.88□□□□□ -2.11
AFB1YLR040C ZRT3P34240 503 aa1.88□□□□□ -2.11
AFB1YLR040C YKL071WP36086 256 aa1.88□□□□□ -2.11
AFB1YLR040C LAS1P36146 502 aaPredicted RBP1.88□□□□□ -2.11
AFB1YLR040C PCH2P38126 564 aa1.88□□□□□ -2.11
AFB1YLR040C YMR262WP38430 313 aa1.88□□□□□ -2.11
AFB1YLR040C RRG9P40156 214 aa1.88□□□□□ -2.11
AFB1YLR040C UTP15Q04305 513 aaKnown RBP1.88□□□□□ -2.11
AFB1YLR040C APC4Q04601 652 aa1.88□□□□□ -2.11
AFB1YLR040C ARR1Q06596 294 aa1.88□□□□□ -2.11
AFB1YLR040C CPT1P17898 393 aa1.87□□□□□ -2.11
AFB1YLR040C HXT2P23585 541 aa1.87□□□□□ -2.11
AFB1YLR040C MMS21P38632 267 aa1.87□□□□□ -2.11
AFB1YLR040C SMF2P38778 549 aa1.87□□□□□ -2.11
AFB1YLR040C SPO73P40031 143 aa1.87□□□□□ -2.11
AFB1YLR040C YIL059CP40520 121 aa1.87□□□□□ -2.11
AFB1YLR040C DIA1P54005 336 aa1.87□□□□□ -2.11
AFB1YLR040C DBP9Q06218 594 aaKnown RBP1.87□□□□□ -2.11
AFB1YLR040C NFI1Q12216 726 aa1.87□□□□□ -2.11
AFB1YLR040C VPS63O13549 108 aa1.86□□□□□ -2.11
AFB1YLR040C PHO84P25297 587 aaKnown RBP1.86□□□□□ -2.11
AFB1YLR040C POT1P27796 417 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
AFB1YLR040C CIN8P27895 1000 aa1.86□□□□□ -2.11
AFB1YLR040C ERG9P29704 444 aa1.86□□□□□ -2.11
AFB1YLR040C PEX32P38292 413 aa1.86□□□□□ -2.11
AFB1YLR040C EFM1P38732 585 aa1.86□□□□□ -2.11
AFB1YLR040C FMP48P53233 369 aa1.86□□□□□ -2.11
AFB1YLR040C SMD1Q02260 146 aaPredicted RBP1.86□□□□□ -2.11
AFB1YLR040C HRT1Q08273 121 aa1.86□□□□□ -2.11
AFB1YLR040C RPN8Q08723 338 aaKnown RBP1.86□□□□□ -2.11
AFB1YLR040C DFM1Q12743 341 aaKnown RBP1.86□□□□□ -2.11
AFB1YLR040C MHP1P43638 1398 aa1.85□□□□□ -2.11
AFB1YLR040C HSP82P02829 709 aaKnown RBP1.85□□□□□ -2.11
AFB1YLR040C RPS23AP0CX29 145 aaKnown RBP1.85□□□□□ -2.11
AFB1YLR040C RPS23BP0CX30 145 aa1.85□□□□□ -2.11
AFB1YLR040C SPS100P13130 326 aa1.85□□□□□ -2.11
AFB1YLR040C CUP2P15315 225 aa1.85□□□□□ -2.11
AFB1YLR040C ALP1P38971 573 aa1.85□□□□□ -2.11
AFB1YLR040C DSE1P40077 573 aa1.85□□□□□ -2.11
AFB1YLR040C AQR1P53943 586 aa1.85□□□□□ -2.11
AFB1YLR040C RRB1Q04225 511 aaKnown RBP1.85□□□□□ -2.11
AFB1YLR040C GMC1Q04399 608 aa1.85□□□□□ -2.11
AFB1YLR040C MIM1Q08176 113 aa1.85□□□□□ -2.11
AFB1YLR040C REP1P03871 373 aa1.84□□□□□ -2.11
AFB1YLR040C YLL053CP0CD98 152 aa1.84□□□□□ -2.11
AFB1YLR040C CTA1P15202 515 aa1.84□□□□□ -2.11
AFB1YLR040C DCC1P25559 380 aa1.84□□□□□ -2.11
AFB1YLR040C MYO3P36006 1272 aa1.84□□□□□ -2.11
AFB1YLR040C RFT1P38206 574 aaPredicted RBP1.84□□□□□ -2.11
AFB1YLR040C SIF2P38262 535 aa1.84□□□□□ -2.11
AFB1YLR040C RCK1P38622 512 aa1.84□□□□□ -2.11
AFB1YLR040C YMR134WP40207 237 aa1.84□□□□□ -2.11
AFB1YLR040C PMT4P46971 762 aa1.84□□□□□ -2.11
AFB1YLR040C YJL144WP47009 104 aa1.84□□□□□ -2.11
AFB1YLR040C RCF1Q03713 159 aa1.84□□□□□ -2.11
AFB1YLR040C SPH1Q06160 661 aa1.84□□□□□ -2.11
AFB1YLR040C DIB1Q06819 143 aaPredicted RBP1.84□□□□□ -2.11
AFB1YLR040C PML1Q07930 204 aaPredicted RBP1.84□□□□□ -2.11
AFB1YLR040C PRP46Q12417 451 aaPredicted RBP1.84□□□□□ -2.11
AFB1YLR040C PRP39P39682 629 aaKnown RBP1.83□□□□□ -2.12
AFB1YLR040C YIL089WP40500 205 aa1.83□□□□□ -2.12
AFB1YLR040C HIT1P46973 164 aa1.83□□□□□ -2.12
AFB1YLR040C ASG7P46993 209 aa1.83□□□□□ -2.12
AFB1YLR040C CUE3P53137 624 aaKnown RBP1.83□□□□□ -2.12
AFB1YLR040C CAX4P53223 239 aa1.83□□□□□ -2.12
AFB1YLR040C HCH1P53834 153 aa1.83□□□□□ -2.12
AFB1YLR040C VTI1Q04338 217 aa1.83□□□□□ -2.12
AFB1YLR040C GTO3Q04806 366 aa1.83□□□□□ -2.12
AFB1YLR040C NBL1Q3E7Y6 73 aa1.83□□□□□ -2.12
AFB1YLR040C MRPL20P22354 195 aaPredicted RBP1.82□□□□□ -2.12
AFB1YLR040C KTI12P34253 313 aaKnown RBP1.82□□□□□ -2.12
AFB1YLR040C BTT1P40314 149 aaPredicted RBP1.82□□□□□ -2.12
AFB1YLR040C SDS23P53172 527 aa1.82□□□□□ -2.12
AFB1YLR040C SPO24Q3E752 67 aa1.82□□□□□ -2.12
AFB1YLR040C DAL5P15365 543 aa1.81□□□□□ -2.12
AFB1YLR040C YKL187CP34231 750 aa1.81□□□□□ -2.12
AFB1YLR040C PET8P38921 284 aa1.81□□□□□ -2.12
AFB1YLR040C PXR1P53335 271 aaPredicted RBP1.81□□□□□ -2.12
AFB1YLR040C MRX9Q07349 420 aaKnown RBP1.81□□□□□ -2.12
AFB1YLR040C YPL264CQ08980 353 aa1.81□□□□□ -2.12
AFB1YLR040C TAL1P15019 335 aaKnown RBP1.8□□□□□ -2.12
AFB1YLR040C HPR1P17629 752 aaKnown RBP1.8□□□□□ -2.12
AFB1YLR040C ARO4P32449 370 aaKnown RBP1.8□□□□□ -2.12
AFB1YLR040C SDH4P37298 181 aa1.8□□□□□ -2.12
AFB1YLR040C ECM14P38836 430 aa1.8□□□□□ -2.12
AFB1YLR040C SLM1P40485 686 aa1.8□□□□□ -2.12
AFB1YLR040C YIL054WP40524 105 aa1.8□□□□□ -2.12
AFB1YLR040C MIC19P43594 170 aa1.8□□□□□ -2.12
AFB1YLR040C YGL118CP53132 145 aa1.8□□□□□ -2.12
AFB1YLR040C RDL2Q08742 149 aaKnown RBP1.8□□□□□ -2.12
AFB1YLR040C PSY3Q12318 242 aa1.8□□□□□ -2.12
AFB1YLR040C PRM4Q12498 284 aa1.8□□□□□ -2.12
AFB1YLR040C RGS2Q99188 309 aa1.8□□□□□ -2.12
AFB1YLR040C BUD2P33314 1104 aa1.79□□□□□ -2.12
AFB1YLR040C TKL2P33315 681 aa1.79□□□□□ -2.12
AFB1YLR040C SMC2P38989 1170 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms