RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C RFC4P40339 323 aaKnown RBP10.41□□□□□ -0.74
YKR040CYKR040C IDS2P46958 469 aa10.41□□□□□ -0.74
YKR040CYKR040C SNF12P53628 566 aa10.41□□□□□ -0.74
YKR040CYKR040C TFB3Q03290 321 aa10.41□□□□□ -0.74
YKR040CYKR040C SCS7Q03529 384 aa10.41□□□□□ -0.74
YKR040CYKR040C SNT309Q06091 175 aaPredicted RBP10.41□□□□□ -0.74
YKR040CYKR040C YOR343CQ12484 108 aa10.41□□□□□ -0.74
YKR040CYKR040C RPB8P20436 146 aa10.4□□□□□ -0.74
YKR040CYKR040C POL4P25615 582 aa10.4□□□□□ -0.74
YKR040CYKR040C MAE1P36013 669 aaKnown RBP10.4□□□□□ -0.74
YKR040CYKR040C CHK1P38147 527 aa10.4□□□□□ -0.74
YKR040CYKR040C FET3P38993 636 aa10.4□□□□□ -0.74
YKR040CYKR040C MDJ2P42834 146 aa10.4□□□□□ -0.74
YKR040CYKR040C IRC7P43623 340 aa10.4□□□□□ -0.74
YKR040CYKR040C ILM1P47155 203 aa10.4□□□□□ -0.74
YKR040CYKR040C MSY1P48527 492 aa10.4□□□□□ -0.74
YKR040CYKR040C SOK2P53438 785 aaPredicted RBP10.4□□□□□ -0.74
YKR040CYKR040C COS1P53822 381 aa10.4□□□□□ -0.74
YKR040CYKR040C VBA4Q04602 768 aaKnown RBP10.4□□□□□ -0.74
YKR040CYKR040C SNO4Q04902 237 aa10.4□□□□□ -0.74
YKR040CYKR040C HSP33Q08914 237 aaKnown RBP10.4□□□□□ -0.74
YKR040CYKR040C HSP32Q08992 237 aa10.4□□□□□ -0.74
YKR040CYKR040C SPC3Q12133 184 aa10.4□□□□□ -0.74
YKR040CYKR040C YDL007C-AQ2V2Q0 85 aa10.4□□□□□ -0.74
YKR040CYKR040C RIB3Q99258 208 aa10.4□□□□□ -0.74
YKR040CYKR040C PEP4P07267 405 aaKnown RBP10.39□□□□□ -0.75
YKR040CYKR040C CAR2P07991 424 aaKnown RBP10.39□□□□□ -0.75
YKR040CYKR040C SNF6P18888 332 aa10.39□□□□□ -0.75
YKR040CYKR040C BUD5P25300 642 aaPredicted RBP10.39□□□□□ -0.75
YKR040CYKR040C MSN4P33749 630 aa10.39□□□□□ -0.75
YKR040CYKR040C YKL071WP36086 256 aa10.39□□□□□ -0.75
YKR040CYKR040C YMR262WP38430 313 aa10.39□□□□□ -0.75
YKR040CYKR040C RPP1P38786 293 aa10.39□□□□□ -0.75
YKR040CYKR040C NAB3P38996 802 aaKnown RBP RIP-Chip data10.39□□□□□ -0.75not detected
YKR040CYKR040C PRE6P40303 254 aaKnown RBP10.39□□□□□ -0.75
YKR040CYKR040C DAM1P53267 343 aa10.39□□□□□ -0.75
YKR040CYKR040C MPP6P53725 186 aaPredicted RBP10.39□□□□□ -0.75
YKR040CYKR040C DML1Q03652 475 aa10.39□□□□□ -0.75
YKR040CYKR040C CRR1Q05790 422 aa10.39□□□□□ -0.75
YKR040CYKR040C CDC39P25655 2108 aaKnown RBP10.39□□□□□ -0.75
YKR040CYKR040C CDC36P06100 191 aaPredicted RBP10.38□□□□□ -0.75
YKR040CYKR040C HAP4P14064 554 aa10.38□□□□□ -0.75
YKR040CYKR040C SBA1P28707 216 aaKnown RBP10.38□□□□□ -0.75
YKR040CYKR040C PTP2P29461 750 aa10.38□□□□□ -0.75
YKR040CYKR040C PRE2P30656 287 aaKnown RBP10.38□□□□□ -0.75
YKR040CYKR040C COS9P36034 407 aa10.38□□□□□ -0.75
YKR040CYKR040C SLM4P38247 162 aa10.38□□□□□ -0.75
YKR040CYKR040C PTH1P38876 190 aaKnown RBP10.38□□□□□ -0.75
YKR040CYKR040C TOK1P40310 691 aa10.38□□□□□ -0.75
YKR040CYKR040C CHA4P43634 648 aa10.38□□□□□ -0.75
YKR040CYKR040C MDE1P47095 244 aa10.38□□□□□ -0.75
YKR040CYKR040C HMS2P47175 358 aa10.38□□□□□ -0.75
YKR040CYKR040C YGL101WP53144 215 aa10.38□□□□□ -0.75
YKR040CYKR040C ASI1P54074 624 aa10.38□□□□□ -0.75
YKR040CYKR040C ABZ2Q03266 374 aa10.38□□□□□ -0.75
YKR040CYKR040C YPR147CQ06522 304 aaKnown RBP10.38□□□□□ -0.75
YKR040CYKR040C RCN2Q12044 265 aa10.38□□□□□ -0.75
YKR040CYKR040C SET6Q12529 373 aa10.38□□□□□ -0.75
YKR040CYKR040C ATR1P13090 542 aa10.37□□□□□ -0.75
YKR040CYKR040C PRP19P32523 503 aaKnown RBP10.37□□□□□ -0.75
YKR040CYKR040C PEP12P32854 288 aa10.37□□□□□ -0.75
YKR040CYKR040C SBE22P38814 852 aa10.37□□□□□ -0.75
YKR040CYKR040C GDI1P39958 451 aaKnown RBP10.37□□□□□ -0.75
YKR040CYKR040C KRE29P40026 464 aa10.37□□□□□ -0.75
YKR040CYKR040C SNL1P40548 159 aa10.37□□□□□ -0.75
YKR040CYKR040C RSA3Q05942 220 aaKnown RBP10.37□□□□□ -0.75
YKR040CYKR040C LOT6Q07923 191 aa10.37□□□□□ -0.75
YKR040CYKR040C BLM10P43583 2143 aa10.37□□□□□ -0.75
YKR040CYKR040C RHO1P06780 209 aaKnown RBP10.36□□□□□ -0.75
YKR040CYKR040C MET2P08465 486 aa10.36□□□□□ -0.75
YKR040CYKR040C HMG1P12683 1054 aa10.36□□□□□ -0.75
YKR040CYKR040C DPM1P14020 267 aaKnown RBP10.36□□□□□ -0.75
YKR040CYKR040C NIC96P34077 839 aa10.36□□□□□ -0.75
YKR040CYKR040C RPS20P38701 121 aaKnown RBP10.36□□□□□ -0.75
YKR040CYKR040C MON1P53129 644 aa10.36□□□□□ -0.75
YKR040CYKR040C YMR265CQ03508 461 aaKnown RBP10.36□□□□□ -0.75
YKR040CYKR040C MRPL1Q04599 285 aa10.36□□□□□ -0.75
YKR040CYKR040C HRT1Q08273 121 aa10.36□□□□□ -0.75
YKR040CYKR040C NIP7Q08962 181 aaKnown RBP10.36□□□□□ -0.75
YKR040CYKR040C ATG15P25641 520 aa10.35□□□□□ -0.75
YKR040CYKR040C MRPL39P36533 70 aa10.35□□□□□ -0.75
YKR040CYKR040C BRR6P53062 197 aa10.35□□□□□ -0.75
YKR040CYKR040C KAP120Q02932 1032 aa10.35□□□□□ -0.75
YKR040CYKR040C RAF1Q06891 181 aa10.35□□□□□ -0.75
YKR040CYKR040C UIP4Q08926 304 aa10.35□□□□□ -0.75
YKR040CYKR040C YDL176WQ12027 708 aa10.35□□□□□ -0.75
YKR040CYKR040C FOL3Q12676 427 aaPredicted RBP10.35□□□□□ -0.75
YKR040CYKR040C HEM4P06174 275 aa10.34□□□□□ -0.75
YKR040CYKR040C TFS1P14306 219 aa10.34□□□□□ -0.75
YKR040CYKR040C SOF1P33750 489 aaKnown RBP10.34□□□□□ -0.75
YKR040CYKR040C ADO1P47143 340 aaKnown RBP10.34□□□□□ -0.75
YKR040CYKR040C COQ11Q05892 277 aa10.34□□□□□ -0.75
YKR040CYKR040C TAF3Q12297 353 aa10.34□□□□□ -0.75
YKR040CYKR040C YDL180WQ12301 547 aa10.34□□□□□ -0.75
YKR040CYKR040C MHF1Q3E835 90 aa10.34□□□□□ -0.75
YKR040CYKR040C THI4P32318 326 aa10.33□□□□□ -0.76
YKR040CYKR040C MCM10P32354 571 aa10.33□□□□□ -0.76
YKR040CYKR040C MDH3P32419 343 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
YKR040CYKR040C CYS4P32582 507 aaKnown RBP10.33□□□□□ -0.76
YKR040CYKR040C MRPL16P38064 232 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 100.5 ms