RNA–Protein interactions for RNA: YKL125W

RRN3, Transcript of Protein required for transcription of rDNA by RNA polymerase I, yeast

Gene RRN3, Length 1,884 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRN3	YKL125W	MHT1	Q12525	324 aa		4.98	□□□□□ -1.61
RRN3	YKL125W	WIP1	Q2V2P8	89 aa		4.98	□□□□□ -1.61
RRN3	YKL125W	SLH1	P53327	1967 aa	Known RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	HXK2	P04807	486 aa	Known RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	HVG1	P0CE11	249 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	YEL076C-A	P0CX16	216 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	YLR464W	P0CX17	216 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	SNF6	P18888	332 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	MNE1	P24720	663 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	RHB1	P25378	209 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	ADE1	P27616	306 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	SFP1	P32432	683 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	MRPL6	P32904	214 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	RRN10	P38204	145 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	YPT31	P38555	223 aa	Known RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	YEL076C	P39971	216 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	GIP2	P40036	548 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	BUR6	P40096	142 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	GLC8	P41818	229 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	LCL3	P53153	274 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	ERV29	P53337	310 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	MPA43	P53583	542 aa	Predicted RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	BUD17	P53727	317 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	GPD1	Q00055	391 aa	Known RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	NUP116	Q02630	1113 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	RIM13	Q03792	727 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	SPC19	Q03954	165 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	CTK1	Q03957	528 aa	Known RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	YDR124W	Q04608	324 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	GPI11	Q06636	219 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	PFK27	Q12471	397 aa	Predicted RBP	4.97	□□□□□ -1.61
RRN3	YKL125W	PET20	Q99373	253 aa		4.97	□□□□□ -1.61
RRN3	YKL125W	CAN1	P04817	590 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	ADH3	P07246	375 aa	Known RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	CBP1	P07252	654 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	DDI2	P0CH63	225 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	DDI3	P0CH64	225 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	NAM2	P11325	894 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	CPR1	P14832	162 aa	Known RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	PER1	P25625	357 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	PRP45	P28004	379 aa	Predicted RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	VBA5	P36172	582 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	URA8	P38627	578 aa	Predicted RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	YIL161W	P40449	235 aa	Known RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	BAP3	P41815	604 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	CAK1	P43568	368 aa	Predicted RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	DPB11	P47027	764 aa	Predicted RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	YJR149W	P47177	404 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	PUS4	P48567	403 aa	Known RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	PEX31	P53203	462 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	MEP3	P53390	489 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	YNR066C	P53752	436 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	DOT1	Q04089	582 aa	Known RBP	4.96	□□□□□ -1.61
RRN3	YKL125W	PPN1	Q04119	674 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	PRM6	Q04705	352 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	CDC123	Q05791	360 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	ECM30	Q06673	1274 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	YOR378W	Q08902	515 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	YPL257W	Q08974	193 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	YDR018C	Q12185	396 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.61	not detected
RRN3	YKL125W	MRX4	Q12467	430 aa		4.96	□□□□□ -1.61
RRN3	YKL125W	YIL177C	P40434	1758 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	YJL225C	P40889	1758 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	CIT1	P00890	479 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	CDC7	P06243	507 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	ATP5	P09457	212 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	MIH1	P23748	554 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	ERG1	P32476	496 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	SDH3	P33421	198 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	MOT2	P34909	587 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	APL3	P38065	1025 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	TAT1	P38085	619 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	FIG1	P38224	298 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	ATG12	P38316	186 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	YER188W	P40103	239 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	GAT2	P40209	560 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	NET1	P47035	1189 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	DIA3	P52290	468 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	ALT2	P52892	507 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	NQM1	P53228	333 aa	Predicted RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	MKC7	P53379	596 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	BIO5	P53744	561 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	RPS15	Q01855	142 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	YML096W	Q04489	525 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	AIM32	Q04689	311 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	YDL057W	Q07379	328 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	FDH1	Q08911	376 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	RGT2	Q12300	763 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	EAF3	Q12432	401 aa		4.96	□□□□□ -1.62
RRN3	YKL125W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	HRP1	Q99383	534 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	FKS1	P38631	1876 aa	Known RBP	4.96	□□□□□ -1.62
RRN3	YKL125W	TIM9	O74700	87 aa		4.95	□□□□□ -1.62
RRN3	YKL125W	RHO2	P06781	192 aa		4.95	□□□□□ -1.62
RRN3	YKL125W	MAG1	P22134	296 aa	Known RBP	4.95	□□□□□ -1.62
RRN3	YKL125W	AIM17	P23180	465 aa	Known RBP	4.95	□□□□□ -1.62
RRN3	YKL125W	EHD3	P28817	500 aa		4.95	□□□□□ -1.62
RRN3	YKL125W	SDH4	P37298	181 aa		4.95	□□□□□ -1.62
RRN3	YKL125W	ROT2	P38138	954 aa		4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms