RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W DGK1Q12382 290 aa4.37□□□□□ -1.71
ABF1YKL112W COX2P00410 251 aa4.36□□□□□ -1.71
ABF1YKL112W CMD1P06787 147 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W PPR1P07272 904 aaPredicted RBP4.36□□□□□ -1.71
ABF1YKL112W RPS4AP0CX35 261 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W RPS4BP0CX36 261 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W YIM1P28625 365 aa4.36□□□□□ -1.71
ABF1YKL112W RML2P32611 393 aa4.36□□□□□ -1.71
ABF1YKL112W PCA1P38360 1216 aa4.36□□□□□ -1.71
ABF1YKL112W PRS3P38689 320 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W ALP1P38971 573 aa4.36□□□□□ -1.71
ABF1YKL112W SSP120P39931 234 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W PAC2P39937 518 aa4.36□□□□□ -1.71
ABF1YKL112W LAS21P40367 830 aa4.36□□□□□ -1.71
ABF1YKL112W SWP82P43554 623 aa4.36□□□□□ -1.71
ABF1YKL112W FMP32P43557 207 aa4.36□□□□□ -1.71
ABF1YKL112W ASG7P46993 209 aa4.36□□□□□ -1.71
ABF1YKL112W DPB11P47027 764 aaPredicted RBP4.36□□□□□ -1.71
ABF1YKL112W GPI14P47088 403 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W GLO1P50107 326 aa4.36□□□□□ -1.71
ABF1YKL112W CCE1Q03702 353 aa4.36□□□□□ -1.71
ABF1YKL112W YDR387CQ04162 555 aa4.36□□□□□ -1.71
ABF1YKL112W DPP1Q05521 289 aa4.36□□□□□ -1.71
ABF1YKL112W FCY22Q12119 530 aa4.36□□□□□ -1.71
ABF1YKL112W USB1Q12208 290 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W TPO4Q12256 659 aa4.36□□□□□ -1.71
ABF1YKL112W OCA6Q12454 224 aa4.36□□□□□ -1.71
ABF1YKL112W YKL183C-AQ3E765 70 aa4.36□□□□□ -1.71
ABF1YKL112W YMR085WP0CF18 432 aa4.36□□□□□ -1.71
ABF1YKL112W ATP10P18496 279 aa4.36□□□□□ -1.71
ABF1YKL112W SCL1P21243 252 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W HYM1P32464 399 aa4.36□□□□□ -1.71
ABF1YKL112W ECT1P33412 323 aa4.36□□□□□ -1.71
ABF1YKL112W WBP1P33767 430 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W PHD1P36093 366 aa4.36□□□□□ -1.71
ABF1YKL112W MRPL15P36523 253 aa4.36□□□□□ -1.71
ABF1YKL112W MMS21P38632 267 aa4.36□□□□□ -1.71
ABF1YKL112W LEU5P38702 357 aa4.36□□□□□ -1.71
ABF1YKL112W SEC24P40482 926 aaKnown RBP4.36□□□□□ -1.71
ABF1YKL112W YFR057WP43625 151 aa4.36□□□□□ -1.71
ABF1YKL112W YJR030CP47101 745 aa4.36□□□□□ -1.71
ABF1YKL112W YAE1P47118 141 aaPredicted RBP4.36□□□□□ -1.71
ABF1YKL112W YDR391CQ04170 232 aa4.36□□□□□ -1.71
ABF1YKL112W YDR124WQ04608 324 aa4.36□□□□□ -1.71
ABF1YKL112W YDR278CQ05612 105 aa4.36□□□□□ -1.71
ABF1YKL112W YPL199CQ08954 240 aa4.36□□□□□ -1.71
ABF1YKL112W HRT3Q12347 344 aa4.36□□□□□ -1.71
ABF1YKL112W DFG16Q99234 619 aa4.36□□□□□ -1.71
ABF1YKL112W VCX1Q99385 411 aa4.36□□□□□ -1.71
ABF1YKL112W YDR157WA0A023PZE8 133 aa4.35□□□□□ -1.71
ABF1YKL112W YLR302CO13544 120 aa4.35□□□□□ -1.71
ABF1YKL112W DFR1P07807 211 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
ABF1YKL112W DDI2P0CH63 225 aa4.35□□□□□ -1.71
ABF1YKL112W DDI3P0CH64 225 aa4.35□□□□□ -1.71
ABF1YKL112W DPM1P14020 267 aaKnown RBP4.35□□□□□ -1.71
ABF1YKL112W BNA4P38169 460 aa4.35□□□□□ -1.71
ABF1YKL112W SGN1P40561 250 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
ABF1YKL112W TPS1Q00764 495 aaKnown RBP4.35□□□□□ -1.71
ABF1YKL112W MSC1Q03104 513 aa4.35□□□□□ -1.71
ABF1YKL112W PEX10Q05568 337 aa4.35□□□□□ -1.71
ABF1YKL112W YPS7Q06325 596 aa4.35□□□□□ -1.71
ABF1YKL112W RAD34Q06665 692 aa4.35□□□□□ -1.71
ABF1YKL112W YOR223WQ12015 292 aa4.35□□□□□ -1.71
ABF1YKL112W YOR114WQ12219 294 aa4.35□□□□□ -1.71
ABF1YKL112W COX17Q12287 69 aa4.35□□□□□ -1.71
ABF1YKL112W YOR012WQ12351 137 aa4.35□□□□□ -1.71
ABF1YKL112W HFA1P32874 2273 aa4.35□□□□□ -1.71
ABF1YKL112W MSN1P22148 382 aa4.34□□□□□ -1.71
ABF1YKL112W RPS1BP23248 255 aaKnown RBP4.34□□□□□ -1.71
ABF1YKL112W YCR015CP25616 317 aa4.34□□□□□ -1.71
ABF1YKL112W RFA3P26755 122 aaKnown RBP4.34□□□□□ -1.71
ABF1YKL112W ACH1P32316 526 aa4.34□□□□□ -1.71
ABF1YKL112W NTH1P32356 751 aa4.34□□□□□ -1.71
ABF1YKL112W SPT14P32363 452 aa4.34□□□□□ -1.71
ABF1YKL112W SRB5P32585 307 aa4.34□□□□□ -1.71
ABF1YKL112W PEX2P32800 271 aa4.34□□□□□ -1.71
ABF1YKL112W EMP70P32802 667 aa4.34□□□□□ -1.71
ABF1YKL112W UTH1P36135 365 aa4.34□□□□□ -1.71
ABF1YKL112W FLO10P36170 1169 aa4.34□□□□□ -1.71
ABF1YKL112W SER33P40510 469 aa4.34□□□□□ -1.71
ABF1YKL112W SER2P42941 309 aa4.34□□□□□ -1.71
ABF1YKL112W COS1P53822 381 aa4.34□□□□□ -1.71
ABF1YKL112W MTD1Q02046 320 aaKnown RBP4.34□□□□□ -1.71
ABF1YKL112W PLB2Q03674 706 aa4.34□□□□□ -1.71
ABF1YKL112W HRD3Q05787 833 aa4.34□□□□□ -1.71
ABF1YKL112W YPR196WQ06595 470 aa4.34□□□□□ -1.71
ABF1YKL112W RXT3Q07458 294 aa4.34□□□□□ -1.71
ABF1YKL112W YBR121C-AP0C5L4 52 aa4.34□□□□□ -1.72
ABF1YKL112W NAM2P11325 894 aa4.34□□□□□ -1.72
ABF1YKL112W CPT1P17898 393 aa4.34□□□□□ -1.72
ABF1YKL112W VPS33P20795 691 aa4.34□□□□□ -1.72
ABF1YKL112W ARG1P22768 420 aa4.34□□□□□ -1.72
ABF1YKL112W EHD3P28817 500 aa4.34□□□□□ -1.72
ABF1YKL112W CTS1P29029 562 aa4.34□□□□□ -1.72
ABF1YKL112W NDC1P32500 655 aa4.34□□□□□ -1.72
ABF1YKL112W EMC3P36039 253 aa4.34□□□□□ -1.72
ABF1YKL112W OXA1P39952 402 aa4.34□□□□□ -1.72
ABF1YKL112W PGD1P40356 397 aa4.34□□□□□ -1.72
ABF1YKL112W SDP1P40479 209 aa4.34□□□□□ -1.72
ABF1YKL112W YIL067CP40514 678 aa4.34□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 53.3 ms