RNA–Protein interactions for RNA: YKL010C

UFD4, Transcript of Ubiquitin-protein ligase (E3), yeastyeast

Gene UFD4, Length 4,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD4YKL010C TAF14P35189 244 aa1.98□□□□□ -2.09
UFD4YKL010C MRPL27P36526 146 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C SEA4P38164 1038 aa1.98□□□□□ -2.09
UFD4YKL010C PEX28P38848 579 aa1.98□□□□□ -2.09
UFD4YKL010C BOL3P39724 118 aa1.98□□□□□ -2.09
UFD4YKL010C FAU1P40099 211 aa1.98□□□□□ -2.09
UFD4YKL010C MOB1P40484 314 aa1.98□□□□□ -2.09
UFD4YKL010C ROG1P53118 685 aa1.98□□□□□ -2.09
UFD4YKL010C BUD17P53727 317 aa1.98□□□□□ -2.09
UFD4YKL010C YNL260CP53846 198 aa1.98□□□□□ -2.09
UFD4YKL010C APM1Q00776 475 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.98□□□□□ -2.09not detected
UFD4YKL010C MTQ2Q03920 221 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C FRE5Q08908 694 aa1.98□□□□□ -2.09
UFD4YKL010C YTM1Q12024 460 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C FLO9P39712 1322 aa1.98□□□□□ -2.09
UFD4YKL010C MATALPHA1P0CY06 175 aa1.98□□□□□ -2.09
UFD4YKL010C HMLALPHA1P0CY07 175 aa1.98□□□□□ -2.09
UFD4YKL010C CDC23P16522 626 aa1.98□□□□□ -2.09
UFD4YKL010C SNF6P18888 332 aa1.98□□□□□ -2.09
UFD4YKL010C DBF2P22204 572 aa1.98□□□□□ -2.09
UFD4YKL010C CNB1P25296 175 aa1.98□□□□□ -2.09
UFD4YKL010C YCL002CP25565 263 aa1.98□□□□□ -2.09
UFD4YKL010C YCR016WP25617 290 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C FUN19P28003 413 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C PET127P32606 800 aa1.98□□□□□ -2.09
UFD4YKL010C YBR063CP38083 404 aa1.98□□□□□ -2.09
UFD4YKL010C RRN10P38204 145 aa1.98□□□□□ -2.09
UFD4YKL010C INM1P38710 295 aa1.98□□□□□ -2.09
UFD4YKL010C ANS1P38832 159 aa1.98□□□□□ -2.09
UFD4YKL010C TAT2P38967 592 aa1.98□□□□□ -2.09
UFD4YKL010C PTI1P39927 425 aaPredicted RBP1.98□□□□□ -2.09
UFD4YKL010C GPG1P53130 126 aa1.98□□□□□ -2.09
UFD4YKL010C RHO5P53879 331 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C YAT1P80235 687 aa1.98□□□□□ -2.09
UFD4YKL010C DML1Q03652 475 aa1.98□□□□□ -2.09
UFD4YKL010C YDR249CQ03787 373 aa1.98□□□□□ -2.09
UFD4YKL010C EMI2Q04409 500 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C RQC1Q05468 723 aaKnown RBP1.98□□□□□ -2.09
UFD4YKL010C GRC3Q07845 632 aa1.98□□□□□ -2.09
UFD4YKL010C HAL9Q12180 1030 aa1.98□□□□□ -2.09
UFD4YKL010C YPR011CQ12251 326 aa1.98□□□□□ -2.09
UFD4YKL010C YLR126CQ12288 251 aa1.98□□□□□ -2.09
UFD4YKL010C BBP1Q12365 385 aa1.98□□□□□ -2.09
UFD4YKL010C RTR2Q12378 196 aa1.98□□□□□ -2.09
UFD4YKL010C MSF1P08425 469 aa1.97□□□□□ -2.09
UFD4YKL010C ERD2P18414 219 aa1.97□□□□□ -2.09
UFD4YKL010C UTR1P21373 530 aa1.97□□□□□ -2.09
UFD4YKL010C SIR1P21691 654 aa1.97□□□□□ -2.09
UFD4YKL010C FAA1P30624 700 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C ARO7P32178 256 aa1.97□□□□□ -2.09
UFD4YKL010C MSS1P32559 526 aaPredicted RBP1.97□□□□□ -2.09
UFD4YKL010C SRB5P32585 307 aa1.97□□□□□ -2.09
UFD4YKL010C TUL1P36096 758 aa1.97□□□□□ -2.09
UFD4YKL010C BET3P36149 193 aa1.97□□□□□ -2.09
UFD4YKL010C RRF1P38771 230 aa1.97□□□□□ -2.09
UFD4YKL010C MDM31P38880 579 aa1.97□□□□□ -2.09
UFD4YKL010C HRB1P38922 454 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
UFD4YKL010C PRP39P39682 629 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C SMB1P40018 196 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C FMP10P40098 244 aa1.97□□□□□ -2.09
UFD4YKL010C YNL195CP40168 261 aa1.97□□□□□ -2.09
UFD4YKL010C MAD2P40958 196 aa1.97□□□□□ -2.09
UFD4YKL010C DIE2P50076 525 aa1.97□□□□□ -2.09
UFD4YKL010C ART5P53244 586 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C PCP1P53259 346 aa1.97□□□□□ -2.09
UFD4YKL010C MNT4P53745 580 aa1.97□□□□□ -2.09
UFD4YKL010C PEX30Q06169 523 aa1.97□□□□□ -2.09
UFD4YKL010C CYK3Q07533 885 aa1.97□□□□□ -2.09
UFD4YKL010C SDO1Q07953 250 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C RRP40Q08285 240 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C FRE3Q08905 711 aa1.97□□□□□ -2.09
UFD4YKL010C YPL199CQ08954 240 aa1.97□□□□□ -2.09
UFD4YKL010C PCL9Q12477 304 aa1.97□□□□□ -2.09
UFD4YKL010C FMP16Q12497 93 aa1.97□□□□□ -2.09
UFD4YKL010C ZWF1P11412 505 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C ARF2P19146 181 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C ERG1P32476 496 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C PDR3P33200 976 aa1.97□□□□□ -2.09
UFD4YKL010C PTH2P34222 208 aa1.97□□□□□ -2.09
UFD4YKL010C YKL063CP35725 167 aa1.97□□□□□ -2.09
UFD4YKL010C LRO1P40345 661 aa1.97□□□□□ -2.09
UFD4YKL010C PAC11P40960 533 aa1.97□□□□□ -2.09
UFD4YKL010C TY4A-JP47023 414 aa1.97□□□□□ -2.09
UFD4YKL010C FAA4P47912 694 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C ASI3P53983 676 aa1.97□□□□□ -2.09
UFD4YKL010C CDA2Q06703 312 aa1.97□□□□□ -2.09
UFD4YKL010C NOP12Q08208 459 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C YOR283WQ12040 230 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C LEU9Q12166 604 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C ISN1Q99312 450 aa1.97□□□□□ -2.09
UFD4YKL010C YDR157WA0A023PZE8 133 aa1.97□□□□□ -2.09
UFD4YKL010C ATP4P05626 244 aa1.97□□□□□ -2.09
UFD4YKL010C MCM10P32354 571 aa1.97□□□□□ -2.09
UFD4YKL010C NRP1P32770 719 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
UFD4YKL010C SSO1P32867 290 aa1.97□□□□□ -2.09
UFD4YKL010C FMP46P36141 133 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C ZTA1P38230 334 aaKnown RBP1.97□□□□□ -2.09
UFD4YKL010C RRN9P53437 365 aa1.97□□□□□ -2.09
UFD4YKL010C MTQ1P53944 314 aa1.97□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms