RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C KKQ8P36004 724 aa2.87□□□□□ -1.95
ATG27YJL178C KDX1P36005 433 aa2.87□□□□□ -1.95
ATG27YJL178C SLM4P38247 162 aa2.87□□□□□ -1.95
ATG27YJL178C SHE3P38272 425 aaKnown RBP2.87□□□□□ -1.95
ATG27YJL178C PRM9P39551 298 aa2.87□□□□□ -1.95
ATG27YJL178C SEO1P39709 593 aa2.87□□□□□ -1.95
ATG27YJL178C MRM2P53123 320 aa2.87□□□□□ -1.95
ATG27YJL178C MTM1P53320 366 aa2.87□□□□□ -1.95
ATG27YJL178C VPS9P54787 451 aa2.87□□□□□ -1.95
ATG27YJL178C YDR476CQ03362 224 aa2.87□□□□□ -1.95
ATG27YJL178C RSN1Q03516 953 aa2.87□□□□□ -1.95
ATG27YJL178C TVP15Q03860 143 aa2.87□□□□□ -1.95
ATG27YJL178C YMR130WQ04223 302 aa2.87□□□□□ -1.95
ATG27YJL178C HRI1Q05905 244 aaKnown RBP2.87□□□□□ -1.95
ATG27YJL178C DCS1Q06151 350 aa2.87□□□□□ -1.95
ATG27YJL178C ASA1Q06822 443 aa2.87□□□□□ -1.95
ATG27YJL178C SKI7Q08491 747 aaPredicted RBP2.87□□□□□ -1.95
ATG27YJL178C ADH2P00331 348 aaKnown RBP2.86□□□□□ -1.95
ATG27YJL178C COX3P00420 269 aa2.86□□□□□ -1.95
ATG27YJL178C HIS1P00498 297 aaKnown RBP2.86□□□□□ -1.95
ATG27YJL178C TRP1P00912 224 aa2.86□□□□□ -1.95
ATG27YJL178C SCEIP03882 235 aa2.86□□□□□ -1.95
ATG27YJL178C GCY1P14065 312 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
ATG27YJL178C CLN1P20437 546 aa2.86□□□□□ -1.95
ATG27YJL178C DPH5P32469 300 aaPredicted RBP2.86□□□□□ -1.95
ATG27YJL178C TOA1P32773 286 aa2.86□□□□□ -1.95
ATG27YJL178C HMT1P38074 348 aa2.86□□□□□ -1.95
ATG27YJL178C PDX3P38075 228 aaKnown RBP2.86□□□□□ -1.95
ATG27YJL178C RRN10P38204 145 aa2.86□□□□□ -1.95
ATG27YJL178C YHR131CP38835 850 aa2.86□□□□□ -1.95
ATG27YJL178C YAL037WP39728 267 aa2.86□□□□□ -1.95
ATG27YJL178C SER3P40054 469 aa2.86□□□□□ -1.95
ATG27YJL178C HPM1P40481 377 aa2.86□□□□□ -1.95
ATG27YJL178C MAM33P40513 266 aa2.86□□□□□ -1.95
ATG27YJL178C ZIM17P42844 174 aa2.86□□□□□ -1.95
ATG27YJL178C CAK1P43568 368 aaPredicted RBP2.86□□□□□ -1.95
ATG27YJL178C ILM1P47155 203 aa2.86□□□□□ -1.95
ATG27YJL178C GPI15P53961 229 aa2.86□□□□□ -1.95
ATG27YJL178C REX2P54964 269 aaKnown RBP2.86□□□□□ -1.95
ATG27YJL178C INP2Q03824 705 aa2.86□□□□□ -1.95
ATG27YJL178C AAD15Q08361 143 aa2.86□□□□□ -1.95
ATG27YJL178C CYC3P06182 269 aa2.85□□□□□ -1.95
ATG27YJL178C YAK1P14680 807 aa2.85□□□□□ -1.95
ATG27YJL178C ARO3P14843 370 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C NSP1P14907 823 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C SPO7P18410 259 aa2.85□□□□□ -1.95
ATG27YJL178C RVS161P25343 265 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C YCR099CP25657 155 aa2.85□□□□□ -1.95
ATG27YJL178C YHR182WP38870 785 aa2.85□□□□□ -1.95
ATG27YJL178C PAN6P40459 309 aa2.85□□□□□ -1.95
ATG27YJL178C TIS11P47977 285 aa2.85□□□□□ -1.95
ATG27YJL178C PRO2P54885 456 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C OAZ1Q02803 292 aa2.85□□□□□ -1.95
ATG27YJL178C GAS3Q03655 524 aa2.85□□□□□ -1.95
ATG27YJL178C TAF12Q03761 539 aa2.85□□□□□ -1.95
ATG27YJL178C ENT5Q03769 411 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C SNT309Q06091 175 aaPredicted RBP2.85□□□□□ -1.95
ATG27YJL178C MEU1Q07938 337 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
ATG27YJL178C BSC6Q08280 497 aa2.85□□□□□ -1.95
ATG27YJL178C TMC1Q08422 150 aaPredicted RBP2.85□□□□□ -1.95
ATG27YJL178C SLF1Q12034 447 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C SPE3Q12074 293 aaKnown RBP2.85□□□□□ -1.95
ATG27YJL178C RBD2Q12270 262 aa2.85□□□□□ -1.95
ATG27YJL178C UBR1P19812 1950 aa2.85□□□□□ -1.95
ATG27YJL178C NFT1P0CE68 1218 aa2.84□□□□□ -1.95
ATG27YJL178C MAS1P10507 462 aa2.84□□□□□ -1.95
ATG27YJL178C AAT2P23542 418 aaKnown RBP2.84□□□□□ -1.95
ATG27YJL178C RBK1P25332 333 aa2.84□□□□□ -1.95
ATG27YJL178C KAR9P32526 644 aa2.84□□□□□ -1.95
ATG27YJL178C PTM1P32857 523 aa2.84□□□□□ -1.95
ATG27YJL178C AST1P35183 429 aa2.84□□□□□ -1.95
ATG27YJL178C MRP21P38175 177 aa2.84□□□□□ -1.95
ATG27YJL178C ECM13P38195 257 aa2.84□□□□□ -1.95
ATG27YJL178C KAP104P38217 918 aaKnown RBP2.84□□□□□ -1.95
ATG27YJL178C JEM1P40358 645 aa2.84□□□□□ -1.95
ATG27YJL178C COA1P40452 197 aa2.84□□□□□ -1.95
ATG27YJL178C NUP84P52891 726 aa2.84□□□□□ -1.95
ATG27YJL178C MIG2P53035 382 aa2.84□□□□□ -1.95
ATG27YJL178C YGR016WP53209 190 aa2.84□□□□□ -1.95
ATG27YJL178C COS6P53344 381 aa2.84□□□□□ -1.95
ATG27YJL178C RCF2P53721 224 aa2.84□□□□□ -1.95
ATG27YJL178C YLR152CP54072 576 aa2.84□□□□□ -1.95
ATG27YJL178C GOT1Q03554 138 aa2.84□□□□□ -1.95
ATG27YJL178C TRM12Q04235 462 aa2.84□□□□□ -1.95
ATG27YJL178C GRX8Q05926 109 aa2.84□□□□□ -1.95
ATG27YJL178C RIF2Q06208 395 aa2.84□□□□□ -1.95
ATG27YJL178C YPQ1Q12010 308 aa2.84□□□□□ -1.95
ATG27YJL178C MDY2Q12285 212 aa2.84□□□□□ -1.95
ATG27YJL178C ISA2Q12425 185 aa2.84□□□□□ -1.95
ATG27YJL178C RNA1P11745 407 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C GCD2P12754 651 aaPredicted RBP2.83□□□□□ -1.96
ATG27YJL178C DCC1P25559 380 aa2.83□□□□□ -1.96
ATG27YJL178C RIM1P32445 135 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C MNS1P32906 549 aa2.83□□□□□ -1.96
ATG27YJL178C RPT5P33297 434 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C PEX5P35056 612 aa2.83□□□□□ -1.96
ATG27YJL178C NPT1P39683 429 aaKnown RBP2.83□□□□□ -1.96
ATG27YJL178C FRT2P39734 528 aa2.83□□□□□ -1.96
ATG27YJL178C YIL001WP40560 513 aa2.83□□□□□ -1.96
ATG27YJL178C CUS2P53830 285 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms